Clupea harengus (Atlantic herring): 105907807
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Entry
105907807 CDS
T09045
Symbol
galnt17
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 17
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00512
Mucin type O-glycan biosynthesis
char00514
Other types of O-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
105907807 (galnt17)
00514 Other types of O-glycan biosynthesis
105907807 (galnt17)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105907807 (galnt17)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
105907807 (galnt17)
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
Mucin-type
105907807 (galnt17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
105907807
NCBI-ProteinID:
XP_012691644
Ensembl:
ENSCHAG00000001009
UniProt:
A0A6P3W8S6
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Position
9:11732637..11740774
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AA seq
613 aa
AA seq
DB search
MIRLIGFRTPTSLMAFMTRRWKVLLVLNLLAVGGFITFWGKCNIRTSKGIGLEASADVRR
HTRLNISGQDTSITNEILLRRLGSLEDVVYRQLNGLSKSLGLVEGFGGRGRGGLPATLAP
AEEKEAKYLKEKYGYNAYLSDKISLDRSIPDYRPSKCRKVYYPRDLPQISLIFIFVNEAL
SVILRSVHSAVNHTPAHLLKEIILVDDNSDEEQLKGPLEEYVNKRYPGLIKIVRNQKREG
LIRARIEGWKVATGEVTGFFDAHVEFTPSWAEPILARVKEDHTRILLPSIDNIKYETFEL
ERYENSGHGYNWELWCMYISPPKQWWDEGDTSAPIRTPAMIGCSFVVNRDYFGELGLLDS
GMDVYGGENIELGIRVWLCGGSMEVLPCSRVAHVARTKKPYHSNIAFHTRRNALRVAEVW
MDEYKSNVYLAWNLPMENHGIDYGDISQRVALRKRLQCKDFEWYLDNIYPEMRRYNSTLF
YGEIRNSDVTNLCMDQGEKENHTATLHPCHGWGPQLGRYTKEGYLFMGPLGSTGEDTHCV
MDDRVSSSPQLINCEKISNVEQKTWNFAQNEAIINRATGRCLEVVQANVLFGYMLVLRSC
TGQRWTIKNTMKQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatacgactaatcggcttcaggactccaacatctttaatggcatttatgacaagaagg
tggaaagttttattggtcctgaatttgttggcagttggtggattcattactttttggggc
aagtgtaatatacgtacgtccaaaggaattggtttagaggcttcggctgatgtgagaaga
cacacacgtttgaacatctctggccaagacacaagcatcactaacgaaatcctgttaagg
agactcgggtcgctggaagacgtggtgtacaggcagctgaacggcttgtccaaatcactg
gggctcgttgaaggctttggaggtcgtggtagaggaggtctgccagcaaccttagctcca
gctgaggagaaagaggccaaatacctgaaggagaaatatggctacaatgcatatctcagt
gacaagatatcactggacagatccatccccgactatcgaccgagcaagtgcagaaaggtc
tactacccaagagacctcccgcagatctccctcatcttcatctttgtgaatgaagcgctc
tctgtcatcctgcgctctgtccattcagccgtcaatcacacaccggcccacctcctcaag
gagatcatcctggtggacgacaacagcgatgaagagcaattgaaagggccgctggaggag
tatgtcaacaagcgctacccgggcctcatcaaaatcgtgcgcaatcagaagagagaggga
ctcatccgtgcacgcatcgaaggctggaaagtggccactggggaagtgacaggcttcttt
gatgcccacgtcgagttcactccttcctgggctgaaccgattctggctagagtcaaggag
gaccacacgaggatcctcctgccctccatagacaacatcaagtatgagacctttgagctg
gagcgctatgagaactctggccacggctacaactgggaactgtggtgcatgtacatcagt
cctccgaagcagtggtgggatgagggtgacacctcagcgcccatcaggactcctgcaatg
atcgggtgctctttcgtcgtgaaccgcgactactttggagagctgggtttgctggactct
ggcatggatgtctatggaggagagaatattgagcttggaatcagggtttggctgtgtggt
ggcagcatggaggtgctgccttgttccagggtggcccacgttgccagaaccaaaaagccg
taccacagcaatatcgcttttcacactcgccgcaacgcactgcgggtcgcagaggtctgg
atggacgagtacaaatctaacgtctacttggcctggaacctccccatggagaatcatggg
attgattacggtgatatatcccaaagagtggcactaaggaaaagacttcagtgcaaagat
tttgagtggtacctggacaacatctacccagagatgaggaggtacaacagcactctgttt
tacggagagatacgcaacagcgatgtgacaaatctttgtatggatcaaggtgaaaaggag
aaccacacagctacactgcatccatgtcatgggtgggggcctcagctgggtcgctacact
aaggagggctacctgttcatgggtccgctgggcagcactggggaagacacacactgcgtc
atggatgatcgagtcagcagctctcctcagctcatcaactgtgagaaaatctccaacgta
gagcaaaagacatggaattttgctcagaatgaggcgatcattaaccgggccacgggccgt
tgtctggaggtggtgcaggctaacgtgctcttcggctacatgctggtcctgaggtcctgc
actggccagaggtggaccatcaaaaacacaatgaagcagtga
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