Citrobacter sp. TSA-1: HF677_005650
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Entry
HF677_005650 CDS
T09275
Name
(GenBank) efflux RND transporter permease subunit
KO
K18899
multidrug efflux pump
Organism
cib
Citrobacter sp. TSA-1
Module
cib_M00697
Multidrug resistance, efflux pump MdtEF-TolC
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cib02000
]
HF677_005650
01504 Antimicrobial resistance genes [BR:
cib01504
]
HF677_005650
Transporters [BR:
cib02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF677_005650
Antimicrobial resistance genes [BR:
cib01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF677_005650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QKE19186
LinkDB
All DBs
Position
complement(1191913..1195029)
Genome browser
AA seq
1038 aa
AA seq
DB search
MANFFIERPVFAWVLAIIMMFTGGIAIMNLPIAQYPQIAPPTITISAAYPGADAKTVEDS
VTQVIEQNMNGLDGLMYMSSTSDAAGNASIILTFKTGTSPDIAQVQVQNKLQLAMPSLPQ
EVQQQGISVDKSSSNILMVAGFISDNNSLSQYDIADYVASNIKDPISRTAGVGSVQLFGS
QYAMRIWLDPQKLDKYNLTPQDVITQLKVQNNQISGGQLGGMPQSADQQLNASIIVQTRL
QTTDEFGKIFLKVQQDGSQVLLRDVARIELGAENYATVARYNGKPAAGIAIKLAAGANAL
ETSQAVKQELNRLSAWFPASMKTVYPYDTTPFIEISIQGVFHTLIEAIILVFLVMYLFLQ
SFRATLIPTIAVPVVILGTFAILDIAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERII
AEEHLSPKAATHKAMGQLQRALVGIAVVLSAVFMPMAFMSGATGEIFRQFSITLISSMLL
SVFVAMSLTPALCAMLLKSHEGEKANTHFLFTRFNHFMEKCTQHYTDSTRKLLRCTGRYM
VVYLVIGAGMIVLFLRTPTSFLPEEDQGVFMTTAQLPSGSTMVNTSKVLGEITDYYLTKE
QKNVASVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIRRAMMALSTINNAV
VYPFNLPAVAELGTASGFDMELLDNGNLGHEKMMQARNELLALANQSSGEVDGVRPNGLE
DTPMFRIHVNATKAEAMGVALSDINQTISTAFGSRYVNDFLNQGRVKKVYVQADTPFRML
PDNINHWYVRNASGAMTPLSAYSSTEWTYGSPRLERYNGQPAMEILGQPVEGKSSGDAMK
FMASLINKLPAGVGYAWTGLSYQEALSTNQAPMLYGISLIVVFLALAALYESWSIPFSVM
LVVPIGVVGALLATDLRGLSNDVYFQVGLLTTMGLSAKNAILIVEFAVEIMQKEGKTPLE
AAVEAAQMRLRPILMTSLAFILGVIPLAISNGAGSGAQNAVGTGVIGGMLAATVLAIYFV
PLFFVLVENMLARFKTRR
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggccaacttttttattgagcgcccggttttcgcctgggtgctcgccattatcatgatg
tttacgggcggtatcgcgataatgaacctgccgatcgcccaatatccacaaatcgctccc
ccaaccattaccatcagcgctgcctacccaggggcagacgcaaagaccgttgaagactcc
gtgactcaggtgattgaacagaatatgaatggtcttgatggcctgatgtatatgtcatcc
accagcgatgcggcaggtaatgcgtcgattatcctgactttcaaaacgggcacgtcaccc
gatattgcgcaggttcaggtacagaataaactgcagctggcgatgccttctttaccgcag
gaagtacagcagcaagggatcagtgttgataaatccagcagcaatattttgatggtcgcc
ggctttatctctgataataacagcctgagccaatatgatattgccgactatgtggcttca
aacatcaaagacccaataagccgcactgccggggtggggagcgtacagttattcggttcg
caatacgccatgcgtatctggctggatccgcaaaagctcgacaagtataacctcacacct
caggacgtcattacccagctcaaagttcagaacaaccagatatcaggcgggcagttggga
ggcatgcctcagtcagccgatcagcagctaaatgcgtcgataatcgtccagacgcgcctg
caaactaccgatgaatttggcaagatcttcctaaaagttcagcaagatggttcccaggtt
ctgctgcgcgatgtcgcgcgaattgagctgggtgcggaaaattatgcaacggttgcacgt
tacaacggcaaacccgccgccgggattgcaattaaacttgccgctggcgcgaatgccctg
gaaacatcccaggcagtcaaacaagagctgaacagattatcggcctggtttccggccagc
atgaaaaccgtttatccctatgacaccactccgtttatcgagatttcgattcagggggtt
tttcatactttgatcgaggcaatcattctggtattcctcgtcatgtatctgtttttgcaa
agtttccgcgcaacgcttattcccacaatcgccgttccggtagtgatccttggcaccttt
gcgatactcgacatcgcgggtttttcgattaatacgctcacgatgtttggcatggtgctg
gcgatagggttgttagtcgatgatgccatcgtggtggttgagaacgtagaacgcattatt
gccgaagaacacttgtcaccaaaagcggcgacccacaaagcgatgggccagttgcagaga
gcgctggtcggtattgccgttgtgttatccgccgtatttatgccgatggcatttatgagc
ggagcaaccggtgaaattttccgtcagttttctatcactttaatctcctccatgctgctg
tcggtgtttgtggcgatgagcctgacgccagcactctgcgccatgctgttgaaatcccac
gagggagaaaaagcaaacacacattttctgtttacccgtttcaatcacttcatggagaaa
tgtactcagcactacacggacagcacccgtaaactgctacgttgcacaggccgttatatg
gtcgtgtacttagtgattggcgcgggcatgattgtgctgtttctacgtaccccgacctcc
tttttgcctgaagaagaccagggggtattcatgaccaccgcgcaattgccttcgggctca
acgatggtgaacaccagcaaagtgctcggggaaataacggattactacctgacgaaagaa
cagaaaaatgtcgcttcggttttcaccgtaggcggatttggttttagcggccaggggcaa
aacaacggtctggcgtttatcagcctgaaaccgtggtcagaacgcgttggtgaagaaaac
tcagttaccgccattattcgacgggcgatgatggccttaagcaccatcaataatgccgtc
gtttatccgtttaatttacccgctgttgcagaactgggaacggcttcaggttttgacatg
gagctgctggataacggtaaccttgggcatgaaaaaatgatgcaggcccgaaacgagctt
ctggcgctggccaaccagtcgtccggtgaggtcgacggggtgcgcccgaatggtctggaa
gatacaccgatgttccgcattcatgtcaacgccacgaaggcagaagccatgggcgttgca
ttatcggatatcaatcagaccatctccacggcgttcggtagtcgctatgtcaatgatttc
ctgaatcagggacgcgttaaaaaagtgtatgtccaggccgatacgccgttccgtatgttg
ccggataatattaatcactggtacgtacgtaatgcctccggcgctatgacgccgctttcg
gcctactcatccaccgaatggacctacggttctccccgccttgaacgctacaacggtcag
cctgcaatggaaattctgggccagccggtcgaagggaaaagcagcggcgatgcgatgaaa
tttatggcatcgctgataaataaactgcctgcgggcgtcggctatgcctggaccggtctg
tcttatcaggaggcgctgtccacaaaccaggcaccaatgctgtacggcatttcgctgatc
gtcgtgtttctggcactggcggcactgtatgaaagctggtcgataccgttctcggtaatg
ctggttgtgccaatcggggtggtcggcgctttgctggcgaccgacttgcgcggcctgagc
aatgatgtttacttccaggtaggcctgctcaccaccatggggctctcggctaaaaacgcc
attctgatcgtcgagttcgccgtcgagatcatgcaaaaggaaggaaaaacgccgcttgaa
gccgcagtagaggccgcgcaaatgcgcttacgccctattttgatgacgtcactggccttt
atcttaggggttatccctctggcaataagcaacggcgcgggctctggtgcgcaaaatgcc
gtcggtacgggtgttattggtgggatgctggccgcgacagtgctggcgatctactttgtt
ccgctgttctttgttctcgtagaaaacatgctggcgcgattcaaaacacggcgctga
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