KEGG   Ciona intestinalis (yellow sea squirt): 100175596
Entry
100175596         CDS       T01056                                 
Name
(RefSeq) tropomyosin alpha-3 chain
  KO
K09290  tropomyosin 3
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04814  Motor proteins
cin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    100175596
   04820 Cytoskeleton in muscle cells
    100175596
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100175596
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     100175596
SSDB
Motif
Pfam: Tropomyosin Laminin_II Lebercilin Crescentin XhlA ATG17_like Sec10_N COG3_N
Other DBs
NCBI-GeneID: 100175596
NCBI-ProteinID: XP_002122265
Ensembl: ENSCING00000004282
UniProt: F6TT18
LinkDB
Position
3:4367558..4370263
AA seq 285 aa
MESIKHKMEGLIKDKDEAIEKAISLENEKRQMEDNAKELEEETSQITKKIVSLEDELDQV
MEQHRLSIEKLDVAEKVATDSELEVNAQTRRMQLLEEEMQRVTERLDEAVAKLEVAEKAA
EESERGRKVIEGRSFKDEETLELQEIQLRDAKGIAEDADRKYEEVGRKLRMVENDLERVL
DRAEEYEAKVKKADDQLKSLNENLRSLEKISADNSEKEDNFEKEIHLLTENLKNAETRAE
FAERTVDKLEKTIDYLEDQLYTEKLAYKGISEKLDKTLSDMITLN
NT seq 858 nt   +upstreamnt  +downstreamnt
atggaatcaatcaagcacaagatggaaggtcttatcaaagacaaagacgaggcaattgaa
aaagctatcagcttggaaaatgaaaaacgtcaaatggaggacaatgcaaaagagttggaa
gaagaaacgagccaaataaccaagaaaatcgtttctttggaagacgagctcgatcaagtg
atggaacaacatcgactttcgattgaaaaacttgacgttgctgaaaaagttgccactgat
tccgagttggaggtgaacgctcaaactcgacgaatgcagttgttggaagaagaaatgcag
agagttaccgaacgtctcgatgaagctgtcgctaagcttgaggtggcagagaaagctgct
gaggagagcgaacggggaaggaaagttattgagggcaggtcattcaaagacgaagaaact
ttggaattacaagaaattcaactccgtgacgcaaagggtatcgcagaagacgccgacaga
aaatacgaagaggttggacgaaaactccgtatggttgaaaatgatttggaacgagttttg
gatcgcgcagaggaatacgaagccaaagtaaagaaagccgacgatcaacttaaatcgctg
aacgaaaaccttcgaagtcttgagaagatttcagctgataattcggagaaggaggacaac
tttgaaaaagaaattcatctgttgactgagaacttgaaaaatgctgagaccagagctgaa
ttcgctgaacgaaccgtggacaaactagaaaagactatcgattatttggaagatcaactc
tacacagagaagttggcatacaagggaatcagcgaaaaattggacaagacactcagtgac
atgataactctcaactag

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