Ciona intestinalis (yellow sea squirt): 100175596
Help
Entry
100175596 CDS
T01056
Name
(RefSeq) tropomyosin alpha-3 chain
KO
K09290
tropomyosin 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100175596
04820 Cytoskeleton in muscle cells
100175596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100175596
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100175596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
Lebercilin
Crescentin
XhlA
ATG17_like
Sec10_N
COG3_N
Motif
Other DBs
NCBI-GeneID:
100175596
NCBI-ProteinID:
XP_002122265
Ensembl:
ENSCING00000004282
UniProt:
F6TT18
LinkDB
All DBs
Position
3:4367558..4370263
Genome browser
AA seq
285 aa
AA seq
DB search
MESIKHKMEGLIKDKDEAIEKAISLENEKRQMEDNAKELEEETSQITKKIVSLEDELDQV
MEQHRLSIEKLDVAEKVATDSELEVNAQTRRMQLLEEEMQRVTERLDEAVAKLEVAEKAA
EESERGRKVIEGRSFKDEETLELQEIQLRDAKGIAEDADRKYEEVGRKLRMVENDLERVL
DRAEEYEAKVKKADDQLKSLNENLRSLEKISADNSEKEDNFEKEIHLLTENLKNAETRAE
FAERTVDKLEKTIDYLEDQLYTEKLAYKGISEKLDKTLSDMITLN
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaatcaagcacaagatggaaggtcttatcaaagacaaagacgaggcaattgaa
aaagctatcagcttggaaaatgaaaaacgtcaaatggaggacaatgcaaaagagttggaa
gaagaaacgagccaaataaccaagaaaatcgtttctttggaagacgagctcgatcaagtg
atggaacaacatcgactttcgattgaaaaacttgacgttgctgaaaaagttgccactgat
tccgagttggaggtgaacgctcaaactcgacgaatgcagttgttggaagaagaaatgcag
agagttaccgaacgtctcgatgaagctgtcgctaagcttgaggtggcagagaaagctgct
gaggagagcgaacggggaaggaaagttattgagggcaggtcattcaaagacgaagaaact
ttggaattacaagaaattcaactccgtgacgcaaagggtatcgcagaagacgccgacaga
aaatacgaagaggttggacgaaaactccgtatggttgaaaatgatttggaacgagttttg
gatcgcgcagaggaatacgaagccaaagtaaagaaagccgacgatcaacttaaatcgctg
aacgaaaaccttcgaagtcttgagaagatttcagctgataattcggagaaggaggacaac
tttgaaaaagaaattcatctgttgactgagaacttgaaaaatgctgagaccagagctgaa
ttcgctgaacgaaccgtggacaaactagaaaagactatcgattatttggaagatcaactc
tacacagagaagttggcatacaagggaatcagcgaaaaattggacaagacactcagtgac
atgataactctcaactag
DBGET
integrated database retrieval system