Ciona intestinalis (yellow sea squirt): 100176804
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Entry
100176804 CDS
T01056
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00052
Galactose metabolism
cin00510
N-Glycan biosynthesis
cin00513
Various types of N-glycan biosynthesis
cin00514
Other types of O-glycan biosynthesis
cin00515
Mannose type O-glycan biosynthesis
cin00533
Glycosaminoglycan biosynthesis - keratan sulfate
cin00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cin01100
Metabolic pathways
Module
cin_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
100176804
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100176804
00513 Various types of N-glycan biosynthesis
100176804
00515 Mannose type O-glycan biosynthesis
100176804
00514 Other types of O-glycan biosynthesis
100176804
00533 Glycosaminoglycan biosynthesis - keratan sulfate
100176804
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
100176804
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100176804
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100176804
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
100176804
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
100176804
2.4.1.90 N-acetyllactosamine synthase
100176804
Glycosyltransferases [BR:
cin01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
100176804
Membrane trafficking [BR:
cin04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100176804
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of breast milk
100176804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
SSP160
HTH_57
Mucin
Motif
Other DBs
NCBI-GeneID:
100176804
NCBI-ProteinID:
XP_018667863
LinkDB
All DBs
Position
1:complement(154506..159125)
Genome browser
AA seq
343 aa
AA seq
DB search
MKLGITKIFFLLTSISCLIMFPIIYKTLTYRSFVKYAARRKIPRSTTTTTTTTTTTTTTT
TTTTTPALELCPKTSPLLKGTITINLSDKDGDESWPPSEEKLFTLFPDLKDGGVYEGPSD
CKCRNKTAIIVPFRDREQHLSYFLYYLHRLLHRQQLCYVIFVVDQNDDKPFNRGRLSNVG
FKYASNLSNFDCYIIHDVDMIAEDDRIMYTCRDRQVVHYTFLLSKFNYNLVYHGYAGGGI
GYTKEQFEKTNGFPNEYYGWGGEDDDINIRINEKGFGIYRSPEPFYRFTMIRHGRDSGNP
PYVGRMERLGKARQRIDVDGLNSLVITNLKEVKHKTYTRIYVT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaggaataactaaaatattttttcttttgacttcaatttcttgtcttatcatg
tttccaatcatctataaaactctgacctatagaagctttgtcaaatacgctgcaagaaga
aaaataccgagatcgacaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
acaacaacaacaacgcccgctttagaactttgtccgaaaacctcgccgctactgaaaggc
accattacaataaatttatcagataaagatggcgatgaaagttggccgccatcagaagag
aagttgttcactctgtttcccgatctaaaagacggcggagtttacgaaggaccaagcgac
tgcaaatgtcggaataaaacagcaataattgtgccttttcgggacagagaacaacattta
agttatttcctgtattacctgcatcgattgttacatcgtcaacagctctgttacgtcata
ttcgtggttgatcagaatgatgacaaaccctttaacagaggaaggctgagcaacgttggg
ttcaaatacgcatcaaatctgagcaactttgattgttacatcatacacgatgtggacatg
atagcagaagacgatcgcatcatgtatacctgcagagatcgccaggtcgtacactacaca
ttccttctaagcaagtttaactacaatctggtgtatcatggctacgcgggaggcggcata
ggttataccaaagagcagtttgagaaaacaaacggatttcccaacgaatattacgggtgg
ggtggcgaagacgatgacatcaacattcgtatcaacgagaaaggattcggtatctatcgt
tctcctgagccattttacagatttacgatgattcgtcacgggagagacagtgggaatccg
ccgtacgtaggaaggatggaaagacttggtaaagctcggcaaagaatagacgtcgacgga
ttgaattcgctcgttataactaatttgaaagaagtgaaacacaaaacatacactcgaata
tatgttacctaa
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