Ciona intestinalis (yellow sea squirt): 778986
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Entry
778986 CDS
T01056
Symbol
socs6
Name
(RefSeq) suppressor of cytokine signaling
KO
K04699
suppressor of cytokine signaling 6/7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
778986 (socs6)
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
778986 (socs6)
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
778986
NCBI-ProteinID:
NP_001072006
Ensembl:
ENSCING00000009026
UniProt:
Q4H2S5
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Position
3:complement(4857697..4861460)
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AA seq
406 aa
AA seq
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MKRFRNLSVNKRKKHLDTAVPEIDNVEPQSKDDNVPINQKAKFKFKFGKTLFRTKSAKKS
SSSNESERNSTIAENKNGPSSSLTDVQSNKDSPIQVNNSNFLNDSTQERSCQTDELSNGQ
AGNVQNITPKQHINGHAGGDQLHSSNYTCNNFTSQGTSENSPNENLYQLPSNDTHTNHSG
KPSQLQEEDTVVPDSTDVYQTPESLDHGIMGATAAPVSPDVNHTFHTLTSLHVPPTMRKN
TLTNEFKKLAQQGWYWGPLTRSEAEDKLNETPNGSFLVRDSSDERYLLSLSFRSFGRTLH
TRIEHSSGNFSFYENNRMQSYDSVVDLIMDSVRDSQEAGIFCYSRTRDPLATTYPVRLIH
PVSRLSQVRTLQYLCRFVIRQYTRIDHIESLPLPNPVKGYLNESYF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttcgtaatttatcagtaaacaaaagaaaaaaacacttagacactgcagtt
ccagaaattgacaacgtggaaccccagagtaaagacgacaatgtcccaatcaatcaaaaa
gcaaagttcaaatttaaatttggaaaaacactttttcggacaaagagtgcaaaaaagtca
tcttcctcaaatgaatctgaaagaaacagtaccattgctgaaaacaaaaatggaccaagt
tcttctttaactgatgttcaatctaataaggatagcccaatacaagtaaacaattctaac
tttttgaatgattcaactcaagaaagaagttgtcaaactgatgaactaagcaatggtcag
gctggaaatgttcaaaacataactccgaagcagcacataaatggccatgcagggggtgac
caactacattcttcaaattacacatgcaacaattttacaagccaagggacctcagaaaat
tctccaaacgaaaacctgtatcaattaccctcaaatgacactcacaccaatcatagtggg
aaaccatcccaattacaagaagaagacactgttgtaccggattccactgatgtttatcaa
actccagagagcttagaccatggtataatgggtgctacagctgctccggtatctccagat
gttaaccacacctttcatacccttacaagtctccatgttccacctaccatgaggaaaaac
acgctcaccaacgagttcaagaaacttgcccaacagggttggtactgggggccgctgaca
aggtcagaagctgaagataaactgaatgaaactccaaatggatctttccttgtcagggat
agttctgatgaaagatatttgctatcactgagttttcgttcttttggaagaactcttcac
actagaattgaacattcttctggtaatttcagcttctatgaaaacaacagaatgcagtct
tatgactcggtagtagatttgatcatggattctgtaagagattcccaggaggccggaata
ttctgttattcaagaactagggaccctcttgctacaacatatcctgttcgattaattcac
cctgtgtcacgcctctcacaggtgcgcactctgcaatacttgtgtcggttcgtcatacgt
cagtacacacgtattgaccatattgaaagcttgccgttgccaaaccccgtcaagggttat
ctcaacgaatcttacttctaa
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