Callithrix jacchus (white-tufted-ear marmoset): 100414132
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Entry
100414132 CDS
T03264
Gene name
IRF3
Definition
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04620
Toll-like receptor signaling pathway
cjc04621
NOD-like receptor signaling pathway
cjc04622
RIG-I-like receptor signaling pathway
cjc04623
Cytosolic DNA-sensing pathway
cjc05133
Pertussis
cjc05135
Yersinia infection
cjc05160
Hepatitis C
cjc05161
Hepatitis B
cjc05162
Measles
cjc05163
Human cytomegalovirus infection
cjc05164
Influenza A
cjc05165
Human papillomavirus infection
cjc05167
Kaposi sarcoma-associated herpesvirus infection
cjc05168
Herpes simplex virus 1 infection
cjc05169
Epstein-Barr virus infection
cjc05170
Human immunodeficiency virus 1 infection
cjc05171
Coronavirus disease - COVID-19
cjc05203
Viral carcinogenesis
cjc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100414132 (IRF3)
04621 NOD-like receptor signaling pathway
100414132 (IRF3)
04622 RIG-I-like receptor signaling pathway
100414132 (IRF3)
04623 Cytosolic DNA-sensing pathway
100414132 (IRF3)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100414132 (IRF3)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100414132 (IRF3)
05161 Hepatitis B
100414132 (IRF3)
05160 Hepatitis C
100414132 (IRF3)
05171 Coronavirus disease - COVID-19
100414132 (IRF3)
05164 Influenza A
100414132 (IRF3)
05162 Measles
100414132 (IRF3)
05168 Herpes simplex virus 1 infection
100414132 (IRF3)
05163 Human cytomegalovirus infection
100414132 (IRF3)
05167 Kaposi sarcoma-associated herpesvirus infection
100414132 (IRF3)
05169 Epstein-Barr virus infection
100414132 (IRF3)
05165 Human papillomavirus infection
100414132 (IRF3)
09171 Infectious disease: bacterial
05135 Yersinia infection
100414132 (IRF3)
05133 Pertussis
100414132 (IRF3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100414132 (IRF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100414132 (IRF3)
04131 Membrane trafficking [BR:
cjc04131
]
100414132 (IRF3)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100414132 (IRF3)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100414132 (IRF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100414132
NCBI-ProteinID:
XP_002762423
Ensembl:
ENSCJAG00000003637
LinkDB
All DBs
Position
22
AA seq
432 aa
AA seq
DB search
MMGRTMGTPKPRILPWLELQLNLGQLEGVAWVNESRTRFRIPWKHGLRHDAQQEDFGIFQ
AWAEATGAYVPGRDKPDPPTWKRNFRSALNRKDGLRLADDRSKDPHDPHKIYEFVNSAVG
NFAQPDTSPDTSGGGSTFDTQEDILDELLGNMVLAPLPDSGPPGLAVAPEPYPQPLLSPS
LDNPTPFPNPEPSENPLRRLLVPGEEWEFEVTAFYRGRQVFQQTISCPGGLRLVGSEVAD
RTLPGWPITLPDPGASLTDKGVMTYVRHVLSRLGGGLALWQAGQQLWAQRLGQCHTYWAV
SEELLPNSGNGPDGEVPKDKEGGVLDLGPFIVDLITFTEGSGRSPRYTLWFCVGEPWPQD
QPWTKRLVMVKVVPTCLRALVELARAGGASSLENTVELHISNSHPLSLTSDQYKAYLKDL
VEDMDFQGPGEA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgggccggaccatgggaaccccaaagccacggatcctgccctggctggagttgcag
ctgaatctggggcagctggagggtgtggcctgggtgaatgagagccgcacgcgcttccgc
atcccttggaaacacggtctacggcatgatgcacagcaggaggatttcggaatcttccag
gcctgggctgaggccactggtgcatacgttcccgggagagataagccagacccgccaacc
tggaagaggaatttccgttctgccctcaaccgcaaagatggattgcgtttagcagatgac
cgaagcaaggaccctcacgacccacataagatctacgagtttgtgaactcagcagttggg
aactttgcccagccagacacatctccagacaccagtggcggaggcagtacttttgatacc
caggaagacattctggatgagttactgggtaacatggtcttggccccactcccagattcg
ggaccaccaggcctggctgtagcccctgagccctaccctcagcccctgctgagccccagc
ttggataatcccacgcccttcccaaacccggagccctctgagaatccactgaggcggctg
ctggtgccgggggaagagtgggagttcgaggtgacagccttctaccggggccgccaagtc
ttccagcagaccatctcctgcccagggggcctgcggctggtggggtcggaagtggcagac
aggacgctgcctggatggcccatcacactgccagaccctggcgcatccctgacagacaag
ggcgtgatgacctatgtgaggcacgtgctgagccgcctgggtgggggactggctctgtgg
caggccggacagcagctctgggcccagcggctggggcagtgccacacgtactgggcagtg
agcgaggagttgctccccaacagtgggaatgggcctgatggcgaggttcccaaggacaag
gaaggaggcgtgctcgacctgggacccttcattgtagatctgattaccttcactgaagga
agcggacgctcaccacgctataccctctggttctgtgttggggagccatggccccaggac
cagccatggaccaagaggctcgtgatggtcaaggttgtgcccacatgcctcagggccttg
gtagagctggcccgggcagggggtgcctcctccctggagaacacagtggaactgcacatt
tccaacagccacccactctccctcacctctgaccagtacaaggcctacctgaaggacttg
gtggaggacatggatttccagggccctggggaggcctga
DBGET
integrated database retrieval system
