Callithrix jacchus (white-tufted-ear marmoset): 100414132
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Entry
100414132 CDS
T03264
Symbol
IRF3
Name
(RefSeq) interferon regulatory factor 3 isoform X4
KO
K05411
interferon regulatory factor 3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04620
Toll-like receptor signaling pathway
cjc04621
NOD-like receptor signaling pathway
cjc04622
RIG-I-like receptor signaling pathway
cjc04623
Cytosolic DNA-sensing pathway
cjc04936
Alcoholic liver disease
cjc05133
Pertussis
cjc05135
Yersinia infection
cjc05160
Hepatitis C
cjc05161
Hepatitis B
cjc05162
Measles
cjc05163
Human cytomegalovirus infection
cjc05164
Influenza A
cjc05165
Human papillomavirus infection
cjc05167
Kaposi sarcoma-associated herpesvirus infection
cjc05168
Herpes simplex virus 1 infection
cjc05169
Epstein-Barr virus infection
cjc05170
Human immunodeficiency virus 1 infection
cjc05171
Coronavirus disease - COVID-19
cjc05203
Viral carcinogenesis
cjc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100414132 (IRF3)
04621 NOD-like receptor signaling pathway
100414132 (IRF3)
04622 RIG-I-like receptor signaling pathway
100414132 (IRF3)
04623 Cytosolic DNA-sensing pathway
100414132 (IRF3)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100414132 (IRF3)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100414132 (IRF3)
05161 Hepatitis B
100414132 (IRF3)
05160 Hepatitis C
100414132 (IRF3)
05171 Coronavirus disease - COVID-19
100414132 (IRF3)
05164 Influenza A
100414132 (IRF3)
05162 Measles
100414132 (IRF3)
05168 Herpes simplex virus 1 infection
100414132 (IRF3)
05163 Human cytomegalovirus infection
100414132 (IRF3)
05167 Kaposi sarcoma-associated herpesvirus infection
100414132 (IRF3)
05169 Epstein-Barr virus infection
100414132 (IRF3)
05165 Human papillomavirus infection
100414132 (IRF3)
09171 Infectious disease: bacterial
05135 Yersinia infection
100414132 (IRF3)
05133 Pertussis
100414132 (IRF3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100414132 (IRF3)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
100414132 (IRF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100414132 (IRF3)
04131 Membrane trafficking [BR:
cjc04131
]
100414132 (IRF3)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100414132 (IRF3)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
100414132 (IRF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100414132
NCBI-ProteinID:
XP_008986665
Ensembl:
ENSCJAG00000003637
LinkDB
All DBs
Position
22:complement(42008037..42013757)
Genome browser
AA seq
431 aa
AA seq
DB search
MMGRTMGTPKPRILPWLELQLNLGQLEGVAWVNESRTRFRIPWKHGLRHDAQQEDFGIFQ
AWAEATGAYVPGRDKPDPPTWKRNFRSALNRKDGLRLADDRSKDPHDPHKIYEFVNSVGN
FAQPDTSPDTSGGGSTFDTQEDILDELLGNMVLAPLPDSGPPGLAVAPEPYPQPLLSPSL
DNPTPFPNPEPSENPLRRLLVPGEEWEFEVTAFYRGRQVFQQTISCPGGLRLVGSEVADR
TLPGWPITLPDPGASLTDKGVMTYVRHVLSRLGGGLALWQAGQQLWAQRLGQCHTYWAVS
EELLPNSGNGPDGEVPKDKEGGVLDLGPFIVDLITFTEGSGRSPRYTLWFCVGEPWPQDQ
PWTKRLVMVKVVPTCLRALVELARAGGASSLENTVELHISNSHPLSLTSDQYKAYLKDLV
EDMDFQGPGEA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatgggccggaccatgggaaccccaaagccacggatcctgccctggctggagttgcag
ctgaatctggggcagctggagggtgtggcctgggtgaatgagagccgcacgcgcttccgc
atcccttggaaacacggtctacggcatgatgcacagcaggaggatttcggaatcttccag
gcctgggctgaggccactggtgcatacgttcccgggagagataagccagacccgccaacc
tggaagaggaatttccgttctgccctcaaccgcaaagatggattgcgtttagcagatgac
cgaagcaaggaccctcacgacccacataagatctacgagtttgtgaactcagttgggaac
tttgcccagccagacacatctccagacaccagtggcggaggcagtacttttgatacccag
gaagacattctggatgagttactgggtaacatggtcttggccccactcccagattcggga
ccaccaggcctggctgtagcccctgagccctaccctcagcccctgctgagccccagcttg
gataatcccacgcccttcccaaacccggagccctctgagaatccactgaggcggctgctg
gtgccgggggaagagtgggagttcgaggtgacagccttctaccggggccgccaagtcttc
cagcagaccatctcctgcccagggggcctgcggctggtggggtcggaagtggcagacagg
acgctgcctggatggcccatcacactgccagaccctggcgcatccctgacagacaagggc
gtgatgacctatgtgaggcacgtgctgagccgcctgggtgggggactggctctgtggcag
gccggacagcagctctgggcccagcggctggggcagtgccacacgtactgggcagtgagc
gaggagttgctccccaacagtgggaatgggcctgatggcgaggttcccaaggacaaggaa
ggaggcgtgctcgacctgggacccttcattgtagatctgattaccttcactgaaggaagc
ggacgctcaccacgctataccctctggttctgtgttggggagccatggccccaggaccag
ccatggaccaagaggctcgtgatggtcaaggttgtgcccacatgcctcagggccttggta
gagctggcccgggcagggggtgcctcctccctggagaacacagtggaactgcacatttcc
aacagccacccactctccctcacctctgaccagtacaaggcctacctgaaggacttggtg
gaggacatggatttccagggccctggggaggcctga
DBGET
integrated database retrieval system