Citrobacter koseri: CKO_03279
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Entry
CKO_03279 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cko
Citrobacter koseri
Pathway
cko00540
Lipopolysaccharide biosynthesis
cko01100
Metabolic pathways
Module
cko_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CKO_03279
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cko01005
]
CKO_03279
Enzymes [BR:
cko01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CKO_03279
Lipopolysaccharide biosynthesis proteins [BR:
cko01005
]
Lipid A
CKO_03279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ABV14363
UniProt:
A8ALK0
LinkDB
All DBs
Position
complement(3046928..3047845)
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVDAPEIPIMDGSAAPFVYLLLDAGI
DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFTLDFTIDFNHPAIDSSSQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgacaggtgtcggtttacatacc
ggcaagaaagtcaccctgaccttacgccctgcgccggccaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggtagatttcccggccgatgccaaatctgtgcgtgatacc
atgctctgtacgtgtctggtcaacgagcatgatgtacggatttcaaccgtagagcacctt
aacgctgctctggcgggtctgggtatcgataatatcgttatcgaagtcgatgcgccggaa
atcccgatcatggatggcagtgctgctccgtttgtctacctgctgcttgatgcgggtatt
gatgagctgaactgcgccaaaaaatttgtacgcatcaaagagacggttcgcgtcgaagat
ggcgataagtgggctgaatttaagccgtacaatggttttacgttggatttcaccatcgac
tttaaccatccggcgattgattccagcagccagcgctatgcgatgaacttctctgcggac
gcgttcatgcgccagatcagccgtgcgcgtaccttcggtttcatgcgtgatatcgaatat
ttgcagtcccgtggcctgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggtctgcgttttgaagacgaatttgttcgtcacaaaatg
ctcgacgcgatcggtgacttgttcatgtgcggtcacaacattattggtgcgtttaccgcg
tataagtccggtcacgcattgaataacaaactgttgcaggctgtcctggcgaaacaggaa
gcctgggaatatgtgaccttccaggacgacgcagaactgccgttggctttcaaagcgcct
tcgactgtactggcataa
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