Columba livia (rock pigeon): 102092705
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Entry
102092705 CDS
T02912
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102092705 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102092705 (TDG)
Enzymes [BR:
clv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
102092705 (TDG)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102092705 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
102092705
NCBI-ProteinID:
XP_005500340
UniProt:
A0A2I0MKJ2
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MMTAVPNVEVMAEQPTLEGIPEPNLAQEPPKEVKKGGRKRKAKATEPKQPKKPAAKKEKT
AKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYK
GHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEF
REGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYV
MPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMA
VKEEKYDPGYEAAYGGAYCDRAPYESEQCHFSSNGTAADPQYCEGSSFGEVPNGQWMTQS
FADQIPEFSAGLTREEEGSSA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgccgtgcctaacgtggaagtcatggctgagcagccgactctagagggcatt
ccagagccaaaccttgctcaggagcctcctaaagaagttaaaaaaggaggaaggaaaaga
aaagccaaagcaactgagccaaagcaacccaaaaagcctgctgctaaaaaagaaaaaaca
gccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaagagaaaagtg
gaccgttttaacggtgtatctgaagcggaacttctgaccaagactttgcctgatattttg
acctttgatctggacattgtaataattggcataaaccccggcttgatggcagcttacaaa
ggacatcattaccctggacctggaaaccatttttggaagtgtctattcatgtccggtcta
agtaacgaacagctgaaccatatggatgaccacaccttgccacataaatatgggattgga
tttacaaacatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagttt
cgggaaggagggcgaattctgatgcagaagttacaaaagtataaacctcgtatagcagct
ttcaatggaaaatgtatttatgaaatttttagtaaagaagtttttggaataaaagttaag
aacctggaatttggactgcagccacacaaggtgccagatacagaaactctctgctacgtt
atgccatcatccagtgcaagatgtgctcagtttcctcgcgcgcaagataaagttcattat
tacataaagctgaaagacttaagggatcagctgaaaggcatcgcaccaaacacagaggtg
caggaggtgcagtacacgtttgacttgcaacttgcacaagaggatgctaaaaagatggct
gtcaaagaagaaaaatatgatccaggttacgaagcagcgtatggaggagcttactgtgac
cgtgcaccgtatgaaagcgaacagtgccatttctcttcaaatggaactgcagcggatcca
cagtactgtgaagggtcgtcctttggtgaagttcctaatggacaatggatgacccagtcc
tttgcagaccagattccagagttcagtgctggtttgacacgggaagaagagggaagcagc
gcctaa
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