Cryptococcus neoformans var. grubii H99: CNAG_05428
Help
Entry
CNAG_05428 CDS
T08175
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_05428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_05428
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_05428
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CNAG_05428
Coactivators
SAGA/TFTC/STAGA complex
CNAG_05428
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
CNAG_05428
STAGA complex
CNAG_05428
TFTC complex
CNAG_05428
SAGA complex
CNAG_05428
SLIK complex
CNAG_05428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
RMC1_N
Nbas_N
LisH
Motif
Other DBs
NCBI-GeneID:
23888744
NCBI-ProteinID:
XP_012053602
UniProt:
J9VZH8
LinkDB
All DBs
Position
14:288222..291940
Genome browser
AA seq
837 aa
AA seq
DB search
MSQSPDPSSVKGGAQGQLAPKSSTPAQQPPLTDSKLLRQFVMEYLQSHGFDKALEKLTEQ
VEDANSGVAANAAVLGDADVSKEDADGKATTGEQGGEREAIFRAPGPVPLESNIKRNIPQ
AQAVSASTMSDRITPEFEAQAKYIIEQLQKKVEAVQEEGGDEKEKELRDRAPVDGAMVDV
SEKVAGYEAYRRWVDGGLDVWKAELDNLSFPLFVLLFLDVIHSGFLKTAREFFEKHSAHH
RELHPQDISALSSVSTEEHIKRNPFCARILSEKYVVPLSRNAYDLLLQWLSGASLDDEWE
AGLHSAPGRQKEAIKLIVVSHLNITVSNDSAPLDKVTIASKSGLISSSLPPNINIDAFNT
AAQLKLGPPPMTEKLKEQVTRTLQDEGEAQGANGDANGDIDMISPLPTNESVVKLEPDAE
RDPSVISPDESETLPPIPAVFRIADLKREVEAIKDKRKMIRLGPSGSGASAGSGVLPSVV
TFTLFDHGENANSVEFSRDSSLMAVGSSESCVRLWSLKGDKLKKKGVDIEGNLVEDEGLP
MRKLIGHSGPVYSLSFDPLYGSAGPPSTLLSSSQDGSIRLWSMDTYSNLVVYRGHGKDPV
WDVEWGPMGVYFASASRDRTARLWSSDRVAPLRMYTGHLSDVNCVKFHPNSLYLATASTD
TSCRLWDVQRGACVRLFLGHTDSVTTLSISPDGKTLASAGLDSSIWLWDLGSARPIKKME
GHTGAVTSLSFSAESSVLVSGGLDGTVRCWDVKSAGGERSVDGMFGGADARRGEERGGLP
MNPGDVWDSAPHTPDLLATWPTKRTPILKTHYTPRNLCMVAGSFVPPSNHRTSGGEK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtccccagacccgtcctccgtcaagggtggcgcccaagggcagctagctccc
aaatcatccacacccgcccaacagcctcctctcacagattcaaagcttctccgccagttc
gtcatggaatacttacaatcgcacggtttcgacaaagctctcgaaaagctcactgagcag
gtggaagatgctaattcgggtgtagctgcgaatgcggctgtattgggtgatgcagatgtc
tccaaagaagatgcggatgggaaggcaacgacaggtgaacaaggaggagaaagagaagcc
attttccgagctcccggtcctgtcccgttggaatccaacatcaaacgtaacattccccag
gcccaagctgtttctgcatctacgatgtctgataggatcactcccgaattcgaggctcaa
gcaaaatacattatcgagcagcttcagaaaaaggttgaggcagtccaagaagaggggggg
gatgagaaggagaaggagctgagagatagggcaccggttgatggggcgatggtggatgtc
agtgaaaaagtggctgggtatgaggcttataggagatgggtagatggagggttggatgtt
tggaaggctgaactggataatctgtcgtttccgctttttgtcctcttgtttttggacgtg
atacattctggttttctcaagacagctcgtgaatttttcgaaaagcacagtgcccatcat
cgcgagcttcatccccaggatatttccgcattatcatcagtatcaactgaagaacacata
aagcggaatcctttttgtgctagaatattaagcgaaaaatacgttgttcctttatctcgc
aacgcctatgatttgcttttacaatggctatccggagcgagcttggatgatgaatgggaa
gctggtctccacagtgcccctggcagacaaaaggaggcaatcaagttgatagtggttagc
catttgaacataactgtctccaacgattctgcgcctctcgacaaagtcacaatagcctct
aaatccggtcttatctcatcttccctcccacccaacatcaacattgatgctttcaacact
gccgctcaattgaaactcggtccaccaccaatgacggaaaagctaaaggagcaagttacg
aggactctgcaagatgaaggggaggcacaaggtgccaacggagacgcaaacggcgatatt
gacatgatttcgcccctcccaaccaacgaatctgttgtcaaactcgagcccgacgctgaa
cgtgacccttctgtgatcagccccgacgaatcagaaacgctgccgcctatccctgctgtc
tttcgcatagcagaccttaagcgtgaagtcgaagcgatcaaagataaacgcaagatgatc
cgccttggtccttctggatcaggagcatcagctggatccggcgtcttaccgagtgtggta
acgtttacgctgtttgaccatggtgaaaatgccaactcggtagaattctcgagggatagt
agtttgatggctgttgggagctcggagagttgtgtgaggctttggagcttgaagggagac
aaattgaagaagaagggggtggatatagaagggaatttggtggaagatgaagggctgccg
atgaggaaactaattggccattctgggccagtctattccctttcctttgatcccttgtac
ggctcagctggtccaccttccacgcttttatcctcttcacaagatggatctatccgactt
tggtccatggatacgtactcaaacttggtggtttacagagggcacggtaaagatcctgtt
tgggatgtggaatggggtcctatgggcgtgtactttgcgagcgccagtagggatcggacg
gcgaggttatggagttcagacagggttgcgccgttgagaatgtacactgggcatttatca
gatgtaaattgcgtcaaatttcatcccaattcgctttaccttgccacagcgtccaccgac
acctcttgccgattatgggacgtccaacggggtgcgtgcgtgcgtctcttcctcggacat
accgatagcgtcacaacactctccatttccccggacggcaagaccctagcctcggcaggg
ctggactcgtccatctggctctgggacttgggctccgcccgaccgatcaagaagatggag
ggtcacacaggcgcggtgacaagtcttagtttctcggctgagagttctgttctggtttct
gggggtctggatgggacggtgaggtgttgggatgtgaagagtgcaggaggggagaggagt
gtggatgggatgtttggtggtgcggatgcgaggagaggcgaggagaggggtgggttaccg
atgaatccgggtgatgtttgggatagtgcgcctcatacaccggacctactcgcaacgtgg
ccaacaaaacgaacgcccattctcaaaacacattatacccctcgaaatctgtgtatggta
gccggaagttttgttccgcctagtaaccacaggacgagcggcggggaaaagtag
DBGET
integrated database retrieval system
