Chiloscyllium plagiosum (whitespotted bambooshark): 122545928
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Entry
122545928 CDS
T08871
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122545928 (dse)
Enzymes [BR:
cpla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122545928 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
DUF6400
LdpA_C
Motif
Other DBs
NCBI-GeneID:
122545928
NCBI-ProteinID:
XP_043540733
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All DBs
Position
3:78866758..78950730
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AA seq
956 aa
AA seq
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MKTYTHGIPVIFFINLFCSLLAYTVNEKSGGSIHFMNGNYDGHPMLYFSKSDVEDLRLKA
RSTHRNIANRIWDAGQIMLSSPGEYLPPWDPKHFSAHWNEIYGNNLGVLAMFCVLFPERT
DAMEFAMDYMERMASQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYDDLNRTQQERYLEV
ITDASYHMYETSFIRGWGFQYLHNHQPTNCVALLTGSLILMNQGYLQEAYLWTKQALTVL
EKLMVLLKDVKDGSLNEGVAYGSYTTRSLFQYMFLVQKHFNISHFDHPWIKQHFAFYYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDTYVMRNGSGNWLAEQIRKYRIQEGPGTPAK
GQRWCTLHTEFLWYDGSLTPVPPLDYGIPTLHYFEDWGVVTYGGALPAGVNQPFLSFKSG
KLGGRAIYDMVHQKKYSQWINGWKNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFL
NNALMFSPATAGACFTPWEGQVTEACNSKWLKYKQGISGECRGQVTAALEQNGVVFISGE
AVGAYSPSLKLKSSQRNLFLLQPQLLLLVDQIHLAEDSPLEKMSAYFHNTAVAFEEISED
GVNGAFIRQEDGQYTMFWMDDKGNSEKAGLAFKTYPREYPYNGTYYVNVTTTLRYPVTRA
AYVFFGPSVEIQSFSIRGDSNRVDIYLATNEKTYTVYLLTGETAVKPLFAMVLADHQKIV
FDRTSAIRDTSVQEVKDYVNIVEENLQHTKPVFQQLEKQTLARVLNTDNFRKTAERLLKL
SDQKKTEEAVEKLFSVSLRQAKAKKMKKGKGGGDKFPNNLPDIFAQIEINEKRERKKLLQ
RMQEETSNERNEDMGENVDFTDFSDMKPERGSNKHVKSGSVKPGATVRSTAQSLSASYTR
VFLILNIATFFFLLALQLIRFQKAPSLHTQRFLYAVLLLDSFVLLCLYSSCSQAQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatacacacatggaataccagtcatatttttcataaatctgttctgctcccta
ttagcgtacactgtaaatgaaaaatctggtggtagcatccactttatgaatggaaattat
gacggtcatcccatgctgtactttagtaaaagtgatgtggaggatctgcgactcaaggcg
agaagtactcaccggaatattgcgaacaggatttgggatgcagggcaaatcatgctatct
agtccaggggagtacctgcctccctgggatccaaaacattttagtgctcactggaatgaa
atctacggcaacaatctgggagtactggctatgttctgtgtactgtttcctgaaagaaca
gatgccatggagtttgcaatggactacatggagaggatggcatctcagcctagttggctg
gtgaaagatgcgccatgggatgaagttccactagctcactccctggtgggttttgccact
gcatatgacttcttgtatgacgacctgaacagaactcaacaggagaggtacttggaggta
atcactgatgcatcttaccacatgtatgaaacatctttcattcgcggatggggatttcaa
tatctgcacaaccatcaacctaccaactgtgtggccttgttgacaggaagtctcattctc
atgaaccaaggttatctccaagaagcttacttatggacaaaacaagcccttactgttctg
gagaagttaatggttttactgaaggatgtaaaagatggatccttgaacgaaggtgtggct
tatggcagttacaccaccagatccttattccagtacatgtttctggtacaaaagcacttc
aatatcagccactttgaccacccctggatcaagcagcattttgctttctactacaggact
gtgcttccaggttttcaaaggactgtcgccattgctgattcaaattacaactggttctat
ggtcctgagagtcaactagtgtttctggatacctatgtaatgcgcaatggcagcggtaac
tggttagcagagcagatcagaaagtatcgaatacaggagggaccaggcacaccagccaaa
ggacagagatggtgcacactccatactgaatttctatggtacgatggctccttgactcca
gtgccacctctggattatgggataccaacattacattattttgaagactggggtgttgta
acttatgggggggctttaccagcaggagttaaccaacctttcctgtccttcaagtcgggt
aaacttggaggacgtgcaatctatgacatggttcatcagaagaaatattcacaatggatc
aatggatggaagaattttaatgctggccatgaacatcctgaccagaattctttcacgttt
gcacctaacggggtacctttcatcaccgaggctttgtacggcccaaaatacacctttctc
aacaatgctttaatgttctctccagccacagcaggcgcttgtttcactccttgggaaggg
caggtgacagaagcatgcaattccaagtggttgaaatataagcaagggatctctggggag
tgtcgtggccaggtgacagcagctttggagcagaatggggtggtctttatcagcggagag
gcagtgggagcttacagtccgagtctgaaactgaagagttcccaaaggaaccttttcctt
ctgcaaccccagcttttactcctggtagatcaaatccacttggcagaagatagcccgctt
gaaaaaatgagtgcatatttccataacacagctgtggcttttgaggaaatatctgaagac
ggagtgaatggagcatttattagacaagaagatggtcagtacacaatgttctggatggac
gataaaggcaatagtgaaaaggctggactggcattcaagacttatcctcgtgaatatcca
tataatggtacatactatgtgaatgtcacaactaccctgaggtacccagtcactagagca
gcctatgttttctttggaccttctgtggagattcaaagctttagcattcgaggagattca
aatcgggtagatatctatctagcaacaaatgagaaaacctatacagtttatctcttaaca
ggggaaactgctgtgaaaccactgtttgctatggtactagctgaccatcaaaagattgtg
tttgatagaacttctgcaatcagggatacttcagtgcaggaggtgaaagattatgtgaat
attgttgaggaaaatcttcagcatacaaaaccagtgtttcagcaacttgaaaagcagacc
ttggctcgagtcctgaacactgataacttccggaagacagccgaacgtcttctaaaacta
tcagaccaaaagaagacagaggaagctgttgaaaagttattttctgtctcgcttagacaa
gccaaggccaaaaaaatgaaaaaaggaaaaggtggtggtgataagtttcccaataacctt
cccgatatttttgcacaaattgaaataaatgagaaaagagagcggaagaaattgctgcag
cgaatgcaagaagaaacttccaatgaaagaaatgaggacatgggggaaaatgttgacttt
acagacttttctgatatgaaaccagaacgaggttcaaacaaacatgtaaaaagtggttct
gtgaaaccaggagccactgttcgaagcactgcacaatccttatcagcttcctacacaaga
gtcttcttaattttaaacattgcaaccttctttttcctcttagcattacagttaattcgg
tttcagaaagctccaagcttgcacactcaaagatttctctatgctgtgcttctactagat
agctttgttctgctttgcttgtactcctcttgttctcaagcacagtgctag
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