KEGG   Capsella rubella (pink shepherd's-purse): 17886885
Entry
17886885          CDS       T02984                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03420  Nucleotide excision repair
crb04120  Ubiquitin mediated proteolysis
crb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    17886885
   04120 Ubiquitin mediated proteolysis
    17886885
  09124 Replication and repair
   03420 Nucleotide excision repair
    17886885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:crb04121]
    17886885
   03400 DNA repair and recombination proteins [BR:crb03400]
    17886885
Enzymes [BR:crb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     17886885
Ubiquitin system [BR:crb04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   17886885
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     17886885
   Cul2 complex
     17886885
   Cul3 complex
     17886885
   Cul4 complex
     17886885
   Cul7 complex
     17886885
   Cul8 complex
     17886885
   Cul9 complex
     17886885
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      17886885
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      17886885
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 17886885
NCBI-ProteinID: XP_006292073
UniProt: R0FRV5
LinkDB
Position
Unknown
AA seq 115 aa
MTTLDSDVPMTPAGEASSSTVPSKKSKRFEIKKWSAVSLWAWDIVVDNCAICRNHIMDLC
IECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 348 nt   +upstreamnt  +downstreamnt
atgactactctcgactctgacgttcctatgacccccgccggcgaagcctctagcagcacc
gttccgtcaaagaaatcgaaacgctttgaaatcaagaagtggagcgccgtctctctttgg
gcttgggatatcgttgttgataactgtgcaatctgtaggaatcacatcatggatctgtgt
attgaatgtcaagctaatcaggctagtgctaccagcgaagaatgtactgttgcttggggt
gtctgcaaccatgcctttcacttccactgtatcagcagatggctcaagactcgtcaagtg
tgtccattggataacagcgagtgggaattccagaaatatggtcactaa

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