Crassostrea gigas (Pacific oyster): 109618305
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Entry
109618305 CDS
T03920
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg00230
Purine metabolism
crg01100
Metabolic pathways
crg01232
Nucleotide metabolism
crg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
109618305
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109618305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
109618305
Enzymes [BR:
crg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
109618305
3.6.1.64 inosine diphosphate phosphatase
109618305
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
109618305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
109618305
NCBI-ProteinID:
XP_019921284
UniProt:
K1RD51
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All DBs
Position
LG6:complement(39146697..39159237)
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AA seq
223 aa
AA seq
DB search
MADIGWGQLQAYEAYGRAGDKKEDFNIISYEEALSDKYSSSKHASHSMLFARNDAILWDL
YNTRGTVLMQMRFDGLLGFPGGLVDPGEHPLESANREMVEEIGLDLNILKLSDSDHVVSF
VNKDKNLVLHFYGKEITLSQFQEIELGNLKAPDYGSETLGVIRPPLFTMGDGYRGLPAFL
SNSFAGNARQELLIGLQHFKLLSEDEIQEAVKSWLTFQIKNTQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggctgacattggatggggacagttgcaagcctacgaggcatatggacgagctggggac
aaaaaggaggatttcaatattatatcatatgaagaagctttatcagacaagtattcttca
tccaaacatgcttcacattccatgttgtttgccagaaatgatgctattctatgggatttg
tacaacacacgggggacagtgttgatgcagatgcggtttgatggtttgctgggattccca
ggaggattggtcgatccaggtgaacaccctctagaatctgctaatagggaaatggtggaa
gaaattggtctggatttaaacatattgaaattgtcagacagtgaccatgtggtttcattt
gtgaacaaagacaaaaatcttgttttacatttttatgggaaagaaatcactttgagtcag
tttcaagaaatcgaactaggaaatctgaaggctccagattatggatcagagacactaggg
gtgatacgccctccactgtttacaatgggtgatgggtacagaggactcccagcattcctt
tctaacagctttgcaggaaatgcaagacaagagttgctcattggtttacaacacttcaaa
cttctctctgaggatgaaatccaggaggctgtgaaatcatggctaacatttcaaattaaa
aatactcagtag
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