Campylobacter ureolyticus: CUREO_0803
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Entry
CUREO_0803 CDS
T04021
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cure
Campylobacter ureolyticus
Pathway
cure03030
DNA replication
cure03410
Base excision repair
cure03420
Nucleotide excision repair
cure03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUREO_0803 (ligA)
03410 Base excision repair
CUREO_0803 (ligA)
03420 Nucleotide excision repair
CUREO_0803 (ligA)
03430 Mismatch repair
CUREO_0803 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cure03032
]
CUREO_0803 (ligA)
03400 DNA repair and recombination proteins [BR:
cure03400
]
CUREO_0803 (ligA)
Enzymes [BR:
cure01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CUREO_0803 (ligA)
DNA replication proteins [BR:
cure03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CUREO_0803 (ligA)
DNA repair and recombination proteins [BR:
cure03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CUREO_0803 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUREO_0803 (ligA)
MMR (mismatch excision repair)
DNA ligase
CUREO_0803 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CUREO_0803 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
HHH_5
DNA_ligase_ZBD
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AKT90662
UniProt:
A0A0K1HF80
LinkDB
All DBs
Position
complement(820523..822472)
Genome browser
AA seq
649 aa
AA seq
DB search
MTRDEYIKAIDLLNLWARAYYTEDAPLASDEEYDSLYNKVLEYESQNKSEILKYSPTQKI
GGAISDGFEKLAHINQMWSMEDIFNDDELISWLKRGEKSGFEFYCEPKFDGASLNLLYEN
GILKSAATRGDGVIGEDVTQNAKVIKSIPLKIDYTGKIEIRGEVVISKSDFDELNLQRSK
NGELPLANPRNAAAGSLRQLDSSIVAKRKLKFIPWDAGYNELGLKTHFEIMSFIRKLGFL
QDSFIRVCKTKNEIAKAYDDLVAKRDDKEILMDGMVIRINLLSKCQELGYTVKFPKFMVA
YKFKAVEKVTRLKDIALQVGRSGVVTPVGVLEPVEIDGAIVKNATLHNFDEIKRLGLMKN
DFVNIIRSGDVIPKITSVYKDRRDGSQIEISRPTTCPVCGSHLLDEGVFVKCQNLDCKAR
VINSLIYFASKKCMNIDGLGEAIVKTLFEDGKIAKIRDIYNLKKEDLENLEGFKDKKIAN
LLNAINSSKNSPLYRFITSLGIEHIGEVAAKKLDESFGLKWIDAKKDDFLNLDGFGEAMA
ESLIEFIETNMEKIINLTNIINPKPSVFETKNSVFNNKTVVITGTLSKSRDYFKDLLLKN
GAKVTNSVSKKTDFLLCGSEAGSKLENALKLGVKVIDESEFLKLLESEF
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagatgagtatataaaagcaattgatttgcttaatttatgggctagggcatac
tatacagaagatgcccctttggcaagtgatgaagagtatgacagtctttataataaagtt
ttagagtatgaatcacaaaataaaagtgaaattttaaagtattctccaacacaaaaaata
ggcggagctataagtgatgggtttgaaaaactcgctcacattaatcaaatgtggtctatg
gaagatatttttaacgatgatgaattaatatcttggctaaaaagaggtgaaaaatccgga
tttgagttttattgtgagccaaaatttgatggagcaagtctaaatttactctatgaaaat
ggcattttaaaaagtgctgcaacaagaggtgatggagtaattggcgaagatgtaacgcaa
aatgcaaaagttataaaaagtattccattaaagattgactacacaggaaaaatagagata
agaggtgaagttgtaatatcaaaaagcgactttgatgaattaaatctacaacgctcaaaa
aatggtgaacttccattggcaaatcctagaaatgcagcagctggaagcctaagacagctt
gatagcagtattgttgctaaaagaaaacttaaatttattccttgggatgcaggctataat
gaactaggtttaaaaactcattttgagattatgagcttcattagaaaacttggtttttta
caagatagttttataagagtttgtaaaactaaaaatgaaattgctaaagcttatgatgat
ttagtcgcaaaaagagatgataaagagatcttaatggatggaatggtcataagaataaat
ctgctttcaaaatgtcaagaacttggatatactgttaaatttccaaaatttatggtggct
tataaatttaaggcagttgaaaaagtaacaagactaaaagatattgctttacaagttgga
aggagtggggtggtaactccagttggagttttagagccagttgaaatagatggtgctatt
gtaaaaaatgcaactcttcataattttgacgagataaaacgcctaggacttatgaaaaat
gattttgtaaatattataagaagtggcgatgtaataccaaaaataacaagtgtttataaa
gacaggcgagatggaagccaaatagaaatttcacgccctacaacttgtccagtttgtggt
tcgcatctacttgatgagggtgtgtttgtaaagtgtcaaaatcttgattgtaaagcaagg
gttataaactcacttatttattttgcttctaaaaagtgcatgaatatagacggacttggt
gaagctatcgtaaaaacactttttgaagatggaaaaatagcaaaaattcgagatatttat
aatctaaaaaaagaagatttagaaaatttagaaggctttaaagataaaaaaattgcaaat
ttactaaatgctattaatagttctaaaaattctccactttatcgatttataacttctttg
ggaattgaacatataggtgaagttgcagcaaaaaaactggatgaaagttttggattaaag
tggattgatgctaaaaaagatgattttttaaatcttgatggctttggggaagcaatggct
gagagtttgattgagtttatagaaacaaatatggaaaaaattataaatttaaccaatatc
ataaaccctaaaccatcagtttttgaaactaaaaatagtgtatttaacaataaaactgtt
gtgataactggaactttaagcaaaagcagggattattttaaagatttacttttaaaaaat
ggtgcaaaagttacaaactcagtttctaaaaaaactgattttttgctttgtggaagtgaa
gcaggaagcaaattagaaaacgcattaaaacttggtgttaaagttatagatgagagtgag
tttttaaagcttttagaaagtgaattttaa
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