Dickeya dadantii 3937: Dda3937_02131
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Entry
Dda3937_02131 CDS
T01305
Symbol
metH
Name
(GenBank) homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00270
Cysteine and methionine metabolism
ddd00450
Selenocompound metabolism
ddd00670
One carbon pool by folate
ddd01100
Metabolic pathways
ddd01110
Biosynthesis of secondary metabolites
ddd01230
Biosynthesis of amino acids
Module
ddd_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Dda3937_02131 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Dda3937_02131 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Dda3937_02131 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
Dda3937_02131 (metH)
Enzymes [BR:
ddd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
Dda3937_02131 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-ProteinID:
ADN00252
UniProt:
E0SI43
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All DBs
Position
complement(4351463..4355146)
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AA seq
1227 aa
AA seq
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MANRLQALQQQLAQRIMILDGGMGTMIQSYRLQEEDYRGERFADWHCDLKGNNDLLVLSK
PEVITAIHNDYLAAGADILETNTFNATRIAMADYEMEALSAEINTAAARLARACADEWTA
RTPERPRYVAGVLGPTNRTASISPDVNDPAYRNVSFDQLVEAYRESTRALVEGGVDIILI
ETIFDTLNAKAAIFAVETEFEALGVTLPVMLSGTITDASGRTLSGQTTEAFYNSLRHARP
LSFGLNCALGPDELRQYVAELSRIAECYVTAHPNAGLPNAFGEYDLDADEMARQIGEWAQ
SGFLNIIGGCCGTTPEHIAAMVKAVDGVAPRALPTLPVACRLSGLEPLNIGDDTLFVNVG
ERTNVTGSAKFKRLIKEEKYNEALDVARQQVESGAQVIDINMDEGMLNAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWEVVEAGLKCIQGKGIVNSISMKEGVDAFVHHARLVRRYGAAV
VVMAFDEVGQADTRARKIEICRRAYHILTEEVGFPPEDIIFDPNIFAVATGIDEHNNYAV
DFIEACADIKAQLPHAMISGGVSNVSFSFRGNEPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVILNRRDDGTERMLAIAEKYRGSKSDDDSNKAEAEWRGWPVR
KRLEYALVKGITEFIEQDTEEARAQSARPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVK
SARVMKQAVAYLEPFIQASKDQGSSAGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPTDKILKTAREEKVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRSVGVVSALLSDTQRGDFVARIRKEYETVRIQHGRKKPR
TPPVSLSVARDNAMPIDWESYTPPVAHRLGVQSVSASIETLRNYIDWTPFFMTWSLAGKY
PNILEDEVVGEEAKRLFADANAMLDTLSANGTLNPRGVVGLFPANRVGDDIEIYTDERRT
EVLTVSHHLRQQTEKTDFPNYCLADVVAPKASGKPDYLGAFAVTGGLEEDELAAQWEAQH
DDYNKIMLKALADRLAEAFAEYLHERVRKVHWGYAPNENLGNDALIRENYQGIRPAPGYP
ACPDHTEKATIWQLLDVDNTVGMTLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQRDQV
EDYAVRKQMPVEEIERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcggttacaggcattacagcagcaactggcgcaacgcattatgattctggac
ggcggcatgggcaccatgatccagagttaccgtctgcaggaagaggattaccgcggcgaa
cgctttgccgactggcactgcgacctgaaaggcaataatgacctgctggtgctgagtaag
ccggaggtgatcaccgccattcataatgattatctggcggcgggcgcggatattctggaa
accaacaccttcaacgccacccgcatcgcgatggccgactacgagatggaagcgctgtcg
gcggaaatcaataccgccgctgcccggctggcgcgcgcctgcgccgacgagtggacggca
cgcacgccggagcgcccgcgctatgtcgccggggtgctggggccgaccaaccgtaccgcg
tcgatctcgccggacgtgaacgacccggcgtaccgtaatgttagcttcgaccaactggtg
gaagcgtaccgcgaatcaacccgcgcgctggttgaaggcggcgttgatatcatcctgatc
gaaaccatctttgacaccctgaacgccaaagccgccattttcgcggtggaaaccgaattc
gaggcgttgggcgtcacgctgccggtgatgctctccggcaccattaccgacgcctccggc
cgaaccctatccgggcagaccaccgaagcgttttataactcgctgcgccacgcccggccg
ttgtcgttcggccttaactgcgcgctggggccggacgaactgcgtcagtacgtggcggag
ctgtcgcgcatcgctgagtgctatgtgaccgcacaccccaacgccggtttgccgaatgcc
ttcggcgaatacgatctggacgccgatgagatggcgcgtcaaatcggtgaatgggcgcag
tccggtttcctgaatattatcggcgggtgctgcggcaccacgcctgagcacatcgccgcg
atggtcaaagccgttgacggcgtggcgccgcgtgccttgccgacgttgccggtagcctgc
cgcctgtccgggctggagccgctgaacatcggcgacgacacgctgttcgttaacgttggc
gaacgcaccaacgtcactggctccgctaaattcaaacgcctgatcaaagaagaaaagtac
aacgaagcgctggacgtggcgcgtcagcaggtagaaagcggcgcgcaggtcatcgacatc
aacatggacgagggcatgctcaacgccgaagcggcgatggtgcgtttccttaatctgatc
gccggcgagccggatatcgcccgcgtgccgatcatgatcgactcctccaaatgggaggtg
gtggaagccgggctgaagtgcattcagggcaaaggcatcgtcaactccatctccatgaaa
gaaggcgtggacgcctttgtgcatcatgcccgactggtgcgccgttacggtgccgcggtg
gtggtgatggcgtttgacgaagtggggcaggcggatacccgcgcgcgcaagattgagatt
tgccgccgcgcctaccacatactgaccgaagaggtcggcttcccgccggaagacatcatt
ttcgacccgaacattttcgccgtcgccaccggcattgacgagcacaacaattacgcggtg
gactttatcgaggcctgcgccgacatcaaagcccaactgccgcacgcgatgatttccggc
ggtgtgtccaacgtgtcgttctcgtttcgcggcaacgagccggtacgcgaggcgattcac
gccgtgttcctgtattacgccatccgcaacggcatggacatgggcatcgtcaacgccggt
cagctggcgatctacgacgatttgcccgccgagctgcgcgacgcggtggaagacgtgatt
ctcaaccggcgcgacgacggcaccgaacggatgctggcgattgccgagaagtatcgcggc
agtaaatccgacgacgacagcaataaagctgaggccgaatggcgcggctggccggtgaga
aaacggctggaatacgcgctggtcaaaggcattaccgaatttatcgagcaggacaccgaa
gaggcgcgggcgcagtcagcccgcccgatcgaagtgatcgaagggccgctgatggacggc
atgaacgtggtcggcgatctgttcggcgccggtaagatgttcctgccgcaggtggtgaag
tcggcgcgggtgatgaagcaggcggtggcgtatctggaaccgttcattcaggccagcaaa
gaccagggctccagcgccggcaagattctgctggcgacggtgaagggcgacgtacacgat
atcggtaaaaacatcgtcggcgtggtattgcagtgcaacaactacgagattatcgattta
ggcgtgatggtgccgaccgacaagatcctcaagaccgcccgcgaagagaaggtcgatatc
atcggcctgtcggggctgattaccccgtcgctggacgaaatggtcaatgtcgccaaagag
atggagcgccagggttttacgctgccgttgttgatcggcggcgccaccacctccaaggcg
cacaccgcggtgaagatcgagcagaattatagcggcccgacggtatacgtgcagaatgcg
tcgcgttcggtgggcgtggtgtcggcactgttatcggatactcaacgcggcgactttgtg
gcgcgcatccgcaaagaatacgagacggtgcgtatccagcacggccgcaaaaaaccgcgc
acgccgccggtgtcgctgagcgtggcgcgcgacaacgccatgccgatcgactgggaaagc
tatacgccgccggtggcgcaccgcctcggcgtgcaatcggtttccgccagtatcgagaca
ttgcgtaattacatcgactggacgccgttctttatgacctggtcgctggcgggcaaatac
cccaacattctcgaagacgaggtggtgggcgaagaggccaagcgtctgtttgccgacgcc
aacgccatgctggataccttgtcagccaacggcacgctgaatccgcgtggggtagtgggg
ctgtttccggccaaccgggtgggcgatgacatcgaaatctataccgacgagcgtcgcacc
gaggtgctgaccgtcagccatcatctgcgccagcaaaccgaaaagaccgattttcccaac
tactgtctggcggatgtcgtggcgccaaaagccagcggcaagccggattacctcggtgcg
ttcgcggtgaccggcgggctggaagaggacgaactggccgcacaatgggaagcgcagcac
gacgactacaacaagattatgctcaaagcgctggccgaccggctggcggaagctttcgcc
gagtacctgcacgagcgggtgcgcaaggtccactggggctatgcaccgaacgagaacctc
ggcaacgacgcgctgatccgcgaaaactatcagggtatccgcccggcgccgggctacccg
gcctgtccggatcacaccgagaaagcgaccatctggcaactgctggacgtggataacacc
gtcggtatgacgctcaccgagtcctacgccatgtggccgggcgcgtcggtgtccggctgg
tacttcagccacccggacagcaagtatttcgccgtggcgcaaatccagcgcgatcaggtg
gaagattacgccgttcgcaagcaaatgccggtagaggagatcgagcgctggctggcgccg
aatctggggtatgatgcggactga
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