Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0520200-01
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Entry
Os12t0520200-01 CDS
T02163
Symbol
Os12g0520200
Name
(RAP-DB) Similar to phenylalanine ammonia-lyase.
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00360
Phenylalanine metabolism
dosa00940
Phenylpropanoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
dosa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
Os12t0520200-01 (Os12g0520200)
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
Os12t0520200-01 (Os12g0520200)
Enzymes [BR:
dosa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
Os12t0520200-01 (Os12g0520200)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_aromatic
VAD1-2
Motif
Other DBs
RAP-DB:
Os12t0520200-01
LinkDB
All DBs
Position
chr12:join(20292964..20293334,20293491..20295162)
AA seq
680 aa
AA seq
DB search
MECETGLVDRPLNGDPLYWGKAAEGLAGSHLDEVKRMVVEYRAPLVKIDGAMLSVAKVAA
VAGEAARVQVVLDESARPRLEASREWVFDSTMNGTDTYGVTTGFGGAAHRRTKEFAALQK
ELIRRSDGYTLPTEVTRAAMLVRINTLTQGYSGIRFEILEAIAKLLNANVTPCLPLRGTI
TASGDLVPLSYIAGLITGRQNSAAVAPDGSKVDAAEAFRIAGIEHGFFALQPKEGLAIVN
GTAVGSGLAAIVLFEANVLAVLAEVLSAVYCEVMAGNPEYTDHLIHALKHHPGQIEAAAI
MEHILEGSSYMRLAKEQGELDRLTKLRQDRYAIRTAPQWLGPQVEVIRFATKSIEREINS
VNDNPVIDVARRKALHGGNFQGTPIGVSMDNTRLAIAAIGRLMFSQFSELASSFYSNGLP
SNLSGGRNPSLDYGFNGAEVAMASYCSELQFLANPVTNHVQTAEQHNQSVNSLGLISSRM
TAEAVTILKLMSSTFLIALCQAVDLRQLEESIKAAVNKCVTNVAKKSLAMDDDDLLALLG
AAIDRVAVFTYAEDPCRSSLPLIQKLRAVLMDHALANGDNQLAKVAEFEQQLRAVLHDEV
EAARAAVESGTAPNRITQCRSYPLYRFVRKELGAEYLTGEKTRSPGEEVDKVVIAMNQHK
HINPLLECLSEWKGAPLPLN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagaccggtctggtcgaccgtcccctcaacggcgaccccttgtactggggc
aaggcggcggagggtcttgcggggagccacctcgacgaggtgaagaggatggtggtggag
taccgcgcgccgctggtgaagatcgacggcgccatgctcagcgtcgccaaggtggcagcc
gtcgctggcgaggccgcccgggtgcaggtggtgctggacgaatccgcacgaccccgcctg
gaggctagtcgcgagtgggtcttcgacagcaccatgaacggcaccgacacgtacggcgtc
accaccggcttcggaggtgccgcccaccgccgcaccaaggagttcgccgcgctccagaaa
gagctgatccgccgcagcgacggctacacgctgccgacggaggtcactcgcgcagccatg
ctggtgcgcatcaacaccctcacccagggctactcgggcatccgcttcgagatcctcgag
gccatcgccaagctgctcaacgccaacgtgacgccgtgcctgccgctccggggcaccatc
accgcgtccggcgacctggtcccgctgtcctacatcgccggcctcatcaccggccgccag
aactccgcggcggtggccccggacggcagcaaggtggacgccgctgaggcgttcaggatc
gccggcatcgagcacgggttcttcgcgttgcagcccaaggaagggctcgccatcgtcaac
ggcacggccgtgggctccggcctcgcggcgatcgtgctcttcgaggccaacgtcctggcc
gtccttgccgaggtcctctcggcggtgtactgcgaggtgatggccggcaatccggagtac
accgaccacctcatccacgcgctgaagcaccaccctggacagatcgaagctgcggccatc
atggagcacatactggaaggcagctcctacatgaggcttgccaaggagcagggcgagctt
gaccggttgacgaagctgaggcaggacaggtacgccatccgcacggcgccgcagtggctc
ggcccgcaggtcgaggtcatccgcttcgccaccaagtcgatcgagcgggagatcaactcc
gtcaacgacaacccggtcatcgacgtcgcccgccgcaaggcgctccacggcggcaacttc
cagggcactcccatcggggtgtccatggacaacactcgtctcgccatcgctgccatcggc
aggctcatgttctcgcagttctccgagcttgccagtagcttctacagcaacggccttccc
tccaatctgtccggcgggcgcaacccgagcttggactacggtttcaatggcgccgaggtc
gccatggcgtcctactgctctgagctgcagttcctcgccaacccggtgaccaaccatgtg
cagaccgcggagcagcacaaccagagcgtcaactctctcggcctcatctcctccaggatg
acagcagaggccgtcaccatcctgaagctcatgtcctctactttcctcatcgcactgtgc
caggccgtcgacctgcgccaactcgaggagagcatcaaggccgctgttaacaagtgcgtg
acaaatgtcgccaagaaatccctggccatggacgatgacgatctgctagcgctgctcggc
gctgctatcgaccgcgtggcggtgttcacgtacgcagaagacccatgcagatccagcttg
ccactcatacagaagctccgcgcggtgctcatggaccatgcgctggccaacggtgacaac
cagctggccaaggtggctgagttcgagcagcagctccgcgcggtgctccacgacgaggtg
gaggccgcacgcgcggctgtggagagcggcacggccccgaacaggatcacccagtgtcgc
tcgtacccgctgtacaggttcgtgcgcaaggagctcggcgccgagtacctgaccggcgag
aagacgcggtcgcccggggaggaggtggacaaggtggtgatcgccatgaaccagcacaag
cacatcaacccactgctggagtgcctcagcgagtggaaaggcgcgcccctgccacttaat
tag
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