KEGG   Danio rerio (zebrafish): 100006257
Entry
100006257         CDS       T01004                                 
Symbol
cetn2
Name
(RefSeq) centrin-1
  KO
K10840  centrin-2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100006257 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    100006257 (cetn2)
   03036 Chromosome and associated proteins [BR:dre03036]
    100006257 (cetn2)
   03400 DNA repair and recombination proteins [BR:dre03400]
    100006257 (cetn2)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     100006257 (cetn2)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100006257 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     100006257 (cetn2)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      100006257 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF-hand_4 EF-hand_11 EF-hand_14 Dockerin_1 SurA_N_3 SUB1_ProdP9 SurA_N_2 GPHH DUF5580_M TerB ERAP1_C LETM1_RBD MJ1010-like_2nd
Other DBs
NCBI-GeneID: 100006257
NCBI-ProteinID: XP_001345066
ZFIN: ZDB-GENE-091118-94
Ensembl: ENSDARG00000101510
UniProt: A0A0R4IVN1
LinkDB
Position
14:14662062..14665580
AA seq 172 aa
MATSPKRPSLGAVAPRKKASPKSELTEEQKQEIREAFELFDTDGSGYIEVKELKVAMRAL
GFEPKKEEIKKMIAEVDKEATGKISFTDFLSVMTQKMAEKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNQQEFLRIMKKTSLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccactagtcccaaaagaccctcactgggggctgtggccccacgtaaaaaagccagt
ccaaaatctgaactgacagaagagcaaaagcaggaaatccgtgaggcgttcgagctcttt
gacactgatggctctggttatattgaggtgaaggagttaaaggtggccatgagagcactg
ggcttcgagcctaaaaaggaggagatcaagaaaatgattgcagaggttgataaagaggct
acgggaaagatctctttcactgactttctgtcagtgatgacccaaaaaatggctgaaaaa
gactctaaagaagaaattcttaaggcttttcggttgtttgatgatgatgagactggaaaa
atatctttccggaatctaaagcgagtggcgaaggaactcggggagaacctcacagacgag
gagttacaggaaatgattgatgaagcagacagagatggcgatggggaagtaaaccagcag
gaatttcttcgcatcatgaagaaaacaagtttgtactga

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