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Genome information| Entry | T01004 |
| Org code | dre |
| Name | Danio rerio (zebrafish) |
| Category | Reference genome |
| Annotation | yes |
| Taxonomy | TAX: 7955 |
| Lineage | Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq (Assembly: GCF_049306965.1 Complete Genome)
BioProject: 1248012 |
| Original DB | Sanger, ZFIN |
| Chromosome | 1 |
| Sequence | RS: NC_133176 |
| Length | 63108402 |
| Chromosome | 2 |
| Sequence | RS: NC_133177 |
| Length | 63578853 |
| Chromosome | 3 |
| Sequence | RS: NC_133178 |
| Length | 67698726 |
| Chromosome | 4 |
| Sequence | RS: NC_133179 |
| Length | 76376419 |
| Chromosome | 5 |
| Sequence | RS: NC_133180 |
| Length | 78929807 |
| Chromosome | 6 |
| Sequence | RS: NC_133181 |
| Length | 63407686 |
| Chromosome | 7 |
| Sequence | RS: NC_133182 |
| Length | 80416488 |
| Chromosome | 8 |
| Sequence | RS: NC_133183 |
| Length | 64512798 |
| Chromosome | 9 |
| Sequence | RS: NC_133184 |
| Length | 59035420 |
| Chromosome | 10 |
| Sequence | RS: NC_133185 |
| Length | 50855184 |
| Chromosome | 11 |
| Sequence | RS: NC_133186 |
| Length | 47978265 |
| Chromosome | 12 |
| Sequence | RS: NC_133187 |
| Length | 51766578 |
| Chromosome | 13 |
| Sequence | RS: NC_133188 |
| Length | 56637657 |
| Chromosome | 14 |
| Sequence | RS: NC_133189 |
| Length | 58912081 |
| Chromosome | 15 |
| Sequence | RS: NC_133190 |
| Length | 52006389 |
| Chromosome | 16 |
| Sequence | RS: NC_133191 |
| Length | 59833720 |
| Chromosome | 17 |
| Sequence | RS: NC_133192 |
| Length | 59639751 |
| Chromosome | 18 |
| Sequence | RS: NC_133193 |
| Length | 54272776 |
| Chromosome | 19 |
| Sequence | RS: NC_133194 |
| Length | 51759963 |
| Chromosome | 20 |
| Sequence | RS: NC_133195 |
| Length | 59305174 |
| Chromosome | 21 |
| Sequence | RS: NC_133196 |
| Length | 50219970 |
| Chromosome | 22 |
| Sequence | RS: NC_133197 |
| Length | 41392508 |
| Chromosome | 23 |
| Sequence | RS: NC_133198 |
| Length | 50457056 |
| Chromosome | 24 |
| Sequence | RS: NC_133199 |
| Length | 46235565 |
| Chromosome | 25 |
| Sequence | RS: NC_133200 |
| Length | 40454730 |
| Chromosome | MT; Circular |
| Sequence | RS: NC_002333 |
| Length | 16596 |
| Statistics | Number of nucleotides: 1448808562
Number of protein genes: 27037
Number of RNA genes: 14471
|
| Created | 2002 |
| Reference | PMID: 23594743 |
| Authors | Howe K, Clark MD, Torroja CF, Torrance J, Berthelot C, Muffato M, Collins JE, Humphray S, McLaren K, Matthews L, et al. |
| Title | The zebrafish reference genome sequence and its relationship to the human genome. |
| Journal | Nature 496:498-503 (2013)
DOI: 10.1038/nature12111 |
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Danio rerio (zebrafish)