KEGG   Danio rerio (zebrafish): 100331333
Entry
100331333         CDS       T01004                                 
Symbol
itga4
Name
(RefSeq) integrin alpha-4 isoform X1
  KO
K06483  integrin alpha 4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
dre04514  Cell adhesion molecules
dre04672  Intestinal immune network for IgA production
dre04810  Regulation of actin cytoskeleton
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100331333 (itga4)
   04514 Cell adhesion molecules
    100331333 (itga4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100331333 (itga4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100331333 (itga4)
   04810 Regulation of actin cytoskeleton
    100331333 (itga4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100331333 (itga4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    100331333 (itga4)
   04515 Cell adhesion molecules [BR:dre04515]
    100331333 (itga4)
   04090 CD molecules [BR:dre04090]
    100331333 (itga4)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100331333 (itga4)
  Exosomal proteins of other cancer cells
   100331333 (itga4)
Cell adhesion molecules [BR:dre04515]
 Integrins
  Integrin alpha subunits
   100331333 (itga4)
CD molecules [BR:dre04090]
 Proteins
  100331333 (itga4)
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 FG-GAP_3 Integrin_A_Ig_3 DUF11 Integrin_alpha
Other DBs
NCBI-GeneID: 100331333
NCBI-ProteinID: XP_009303222
ZFIN: ZDB-GENE-110411-108
Ensembl: ENSDARG00000103056
UniProt: A0A0R4ICS1
LinkDB
Position
9:44034522..44088777
AA seq 1018 aa
MISSQLTGDLLKWTSGFGILWYLLILCDCYNLDVEHPLVFNGPNGSLFGYSVLLHQHNEN
TWLLVGAPVANSSFYPNIKSPGAIYNCSMLNSQCEQLPVGGVQRCGRHCLAENDNQWLGV
SLSRQASKGHVLACGHRWKNVFYSSKDNQNKLPHGVCFRFSPDLKHASHIIPCYKDHQRR
FGEGYGSCQAGISNSFTEDLMVMGAPGTSYWTGSVLVVNTTSNISAAYVDDDSDVLYGSY
LGYSVSAGHFLDPQSTEIVGGAPQHEQTGKAYIFRIEGNTLKIVNKTKGKTLGSYYGASV
CAVDLNADGLSDLLVGAPMFSSVREEGRVYVYINQGEAELKEADFELVGSDSYAARFGET
IINLGDIDDDGYPDVAIGAPQEDDLRGAIYIYNGRRSGIARSFSQRITGSLLGNNFRMFG
QSVSGGVDIDSNNYPDVAVGAFLSDSAVVFRTRPVVKVDAVMLLPESLNRSVAQCTENGQ
PAVCIKVRVCFRVRGKQIPGNIELKYNLTADVHHKEGFPSRFYFSGNGTSNVTAGRVKAK
HEQLTCVFHQAFMKKDVRDIFTPIHFEVKYELGEHRVVQRDLGDLPALKPILQQKDELDN
VIKNKTIFARYCSWENCSTNLQVSARLVLPQSYNKMPYFALGNGKSIMLNTTLLNTGDDA
FLPKLHLRFPSNLHFIKVLEEDKLVSCEIVEENKLAIGLDCSVGNLYMPPFSKLNITFLL
DVMQNSSAGDLTVNINATSENFENADLQHDNVAALTLPLRYAVDMNVHGFVSPNLFIIGE
EESVPVDCYPEKFNYTYKVMNIGPSKARDARVKISLPLMLVLYKHQLIRITDIQSTLGHC
FQRNNTIHIIDDCDVPEASVIQELVFFFSPKSKRIMFCGPEDQTCRTVECRFGDLEAGKE
VTINMEVELNPRVLQMSPGRHAVMMIHGSIDLISPVRDANTFLLQDDVSARVMVEALYTH
NPGPVVRIFIIVSSLIVGLIIFGLLVLTLWKLGFFKRTLKEKFRRDSWDYVPKHESVS
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgatttcatcacaactcactggagatttgctgaagtggacatctggatttgggatcctg
tggtacctgttgattctgtgcgattgctacaatctggatgtggagcatcctttagttttt
aacggaccaaacggatcattattcggatactctgttctgcttcaccagcataatgagaac
acatggttgttagttggagcgcctgtggccaattccagcttttatcctaatatcaaaagt
cctggagccatctacaactgcagtatgttgaacagccagtgtgagcagctccctgttgga
ggtgtgcagcgctgtggaagacactgtttggcagagaatgataaccagtggctgggtgtg
agtttgtcccggcaggcctcaaaaggccatgttttggcatgtggacatcgatggaagaat
gttttctactccagtaaagacaatcagaacaagctgccgcatggtgtttgcttcagattc
agcccagatttgaaacacgccagtcatattatcccctgctataaagatcatcaaagaagg
tttggtgagggttatgggtcatgccaagcaggaatatcaaactcattcacagaggattta
atggttatgggagctcctggtacctcatactggactggatctgttctggtcgtcaacaca
acaagcaacatatcagctgcttatgtggatgatgacagtgatgttctctatggcagttat
ttaggttactctgttagtgctggacactttctagatcctcaaagcactgagatagtcggt
ggtgctcctcagcatgaacagactggtaaagcctacatatttaggattgagggcaacact
ttgaaaattgttaacaaaaccaagggcaagacgcttggctcttattatggggcgagtgtt
tgtgctgtcgacctgaacgcagatggactgtctgatctgttggttggagcgccaatgttc
agctcagtgcgggaagagggacgcgtgtatgtttacatcaaccagggagaggctgaactg
aaggaggctgactttgagttagtcggcagtgactcttatgccgcacgatttggagaaacc
atcataaacctcggtgatattgatgatgatggatatccagatgtggccatcggagcccct
caagaggacgatctgcgtggtgctatatatatctacaatggcagaaggagtggcattgca
cggagtttctctcaaagaataacaggctcattgttgggaaacaacttcaggatgtttggt
caatcagtgtctggaggagtggatattgatagcaacaattacccagatgttgcagtggga
gctttcctgtcagactcagctgtggtgttcaggactcgtccagtggtgaaggtggatgct
gttatgttgttgcctgagagcttgaatcgttctgtagcccagtgcactgaaaacggccag
cctgctgtctgcatcaaagtcagggtgtgctttagggtcagaggaaaacaaatccccgga
aacatagagctgaagtacaaccttacagctgatgttcaccacaaagaaggcttcccttct
cgattttatttcagtggaaacggaacatctaacgtaacagcaggcagagtaaaggccaag
catgagcagctcacctgcgtgtttcaccaggccttcatgaagaaagatgttcgtgatatc
ttcacacccattcattttgaggtcaaatatgaacttggagagcatcgtgtggtgcagaga
gacttgggtgatttgcctgcccttaaacccattttacagcagaaggatgaactggacaat
gtcatcaaaaacaagaccatctttgctagatactgctcctgggaaaactgctcaaccaac
ctacaggtttctgctcgtttggttttaccacagtcctacaataaaatgccatattttgct
ctaggtaatggcaaaagcatcatgttaaacaccacactgctcaacactggagatgatgct
tttctccccaaacttcacttaagattccccagcaatctgcatttcatcaaagtgctggag
gaggacaaactcgtcagctgtgaaattgtagaagagaataaactggcaattggactggac
tgcagtgttgggaatttatacatgcctcctttctcaaagctcaacatcacctttttactc
gatgtgatgcagaacagcagtgcgggagaccttactgttaacattaacgctacgagtgag
aactttgagaacgcagatcttcagcatgacaacgtggctgctcttacattgcctttgaga
tacgcagttgatatgaatgttcacggatttgtctctccgaatttatttatcattggagaa
gaggagtctgtgccggtcgactgctatcccgagaagttcaattatacgtacaaggtgatg
aatattggtcctagtaaagctcgtgatgcgagagtgaagatcagcttgcctctgatgctg
gtgctgtacaaacaccagttaatcaggattacagatatacagtcaactcttggccattgc
ttccagaggaacaatactattcacatcattgatgactgtgatgttccggaagcgtctgtc
attcaggaacttgtgttctttttctccccaaaaagcaaacgcataatgttctgtggtcct
gaagatcagacctgtaggactgtggaatgccgcttcggggatctggaggctggaaaggag
gtgaccatcaacatggaggtggagctcaatcccagggttctccagatgagtccgggcaga
cacgctgtcatgatgattcatggatccattgaccttatttcaccagtgagggatgcaaac
accttcttactacaggatgacgtttctgctagagtgatggtggaggctttgtacacccat
aatcctgggccagttgtgcgcatatttattatagtatctagtctgatcgttggactgatc
atttttggactgcttgttcttactttatggaagcttggattcttcaaacggacattgaag
gagaagtttcgacgggacagttgggactatgtgcccaagcatgaaagcgtatcataa

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