Danio rerio (zebrafish): 252849
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Entry
252849 CDS
T01004
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a precursor
KO
K04659
thrombospondin 2/3/4/5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04145
Phagosome
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
252849 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
252849 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
252849 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
252849 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
252849 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
252849 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
252849 (thbs3a)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Phagocytosis
Opsonins
252849 (thbs3a)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
252849 (thbs3a)
Exosomal proteins of colorectal cancer cells
252849 (thbs3a)
Exosomal proteins of bladder cancer cells
252849 (thbs3a)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
252849 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
252849
NCBI-ProteinID:
NP_775332
ZFIN:
ZDB-GENE-020708-3
Ensembl:
ENSDARG00000077641
UniProt:
Q8JHW2
LinkDB
All DBs
Position
16:complement(42900238..42933267)
Genome browser
AA seq
962 aa
AA seq
DB search
MKQMFVHIWVSLVVLMSVWSAQSDKKQDVPVIDVLGLEDVKQTVAAVEKLSLALKTLSDV
YVMSTFRLPPKLGGVLLGLYNKQDNKKYLEVAIMSKINKVLVRYVREDGKLHTVNMQSPN
VADGRPQSLILRVGGLRREYLSLELYVNCRLADSAQRLPPLVDLPRDAELVEIRNGHKAY
ARMQGSMDTLKLALGGTVAQAGALTDCPFQGDASSYNIVNGEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLVRNAILECQMCGFHEPRSRCQPNPCFKGVSCMETFEYPG
YRCGPCPDGMTGNGTHCQDIDECSEAQPCYTPGACVNTARGFTCESCPPGMWGPPLSGVG
VEYAKSHRQECSDIDECVDLANACTPNSVCINIIGSFRCGQCKTGYVGNQTAGCFPRKSC
SSLSFNPCDTNAHCVMQRNGDVSCACNVGWAGNGHTCGKDTDIDGYPDRSLPCMDNHKHC
RQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVSNKDQQNSDTDSFGDA
CDNCPTVPNIDQKDTDSNGEGDACDDDIDGDGIQNVLDNCPKVPNPMQTDRDRDGVGDAC
DSCPEISNPMQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPDIPNSSQLDSDNDGIGDD
CDEDDDNDGIPDNHAINGIGPDNCRLISNPNQKDSDSNGVGDVCENDFDNDSVMDLVDVC
PESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGV
DFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSIPFRAMAEPGLQLKAV
KSRTGPGEFLRNALWHAGDTDGEVKLLWKDPRNVGWLDKTSYRWQLSHRPQVGYIRVKLY
EGSEMVADSDVVIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFSSHRKQVLMHI
KV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatgtttgtacacatttgggtcagtctggtcgtgttgatgtccgtctggtca
gcacagagcgacaagaaacaagacgtgccagtgatagacgtgttgggtttggaggatgtg
aagcagaccgtggccgcggtggagaagctctcattggctctgaagactctcagtgacgtg
tatgtgatgtctacttttcgtcttcctccaaaacttggtggagttctgctggggctctac
aacaaacaggacaacaagaagtacctggaggttgccatcatgagcaagattaacaaagtt
ctggtcaggtatgtccgtgaggatggaaagctgcatacagtgaacatgcagagcccgaat
gttgcggatggacgtcctcagtcactgattctgcgtgtcggaggcctgcgccgggagtat
ctgagcctcgagctctatgtgaactgtcgtctggctgactccgcccagcgcctgccccca
ttggtggatttgcccagagatgctgagctggtggagatacgaaatggacacaaggcatat
gctcggatgcagggttcaatggatactcttaagctggcactggggggcactgttgcccag
gctggcgctctcaccgactgtccctttcagggagacgcttcttcatacaacatagtgaat
ggtgaggttaattctattctaggtgaccacactaaagctctgatcggccagctgatcatc
tttaatcagatcttgggagagttgagagaggacatcagagaacaggtgaaagaaatgtcc
ctggtaaggaacgctattctggagtgccagatgtgtgggtttcacgagcctcgttcccgc
tgtcagccaaacccctgtttcaagggtgtgtcctgcatggagacgtttgaatacccaggg
taccgctgtgggccctgtccagacggcatgacgggcaacggcacacactgtcaggacatc
gatgagtgttcagaggctcagccgtgttatacaccgggtgcttgtgtcaatactgcaaga
ggttttacctgtgagtcgtgtccccctggcatgtggggtccacctttgtctggagtcggt
gtggagtatgctaagagtcaccgtcaggagtgctctgacatcgatgaatgtgtagatttg
gccaacgcctgcacacccaactctgtctgcatcaacattattgggtcatttcgatgcggt
cagtgcaagactggatatgttggcaatcagacagccggatgtttccctcgaaagtcatgt
tcttcactcagtttcaacccctgtgacacgaacgctcactgcgtcatgcaacgcaacggg
gacgtgtcctgcgcttgtaatgttggatgggctggtaatggtcacacctgcgggaaggac
acagatattgatggttatcctgaccgctctctgccctgcatggacaatcacaagcactgc
agacaggacaactgtgtctacacacctaattctggtcaggaagatgcggataatgatgga
attggagatcagtgtgatgaagatgctgatggggacggaattaagaacgtagaggataac
tgtcgtttggtctccaataaagaccagcagaactcggacacagattcgttcggagacgcg
tgtgataactgtcccaccgttcccaacatcgaccagaaagacactgatagcaacggagag
ggagacgcttgtgatgacgacattgatggagatgggattcagaatgttctggataactgt
cctaaagtgccgaacccgatgcagacggaccgagacagagacggagtgggagatgcgtgt
gacagctgtcctgagatcagcaaccccatgcagacggatgtagacaatgacttagtcggg
gatgtttgtgacaccaaccaagacacagatggagacggacaccaggacactcgggataat
tgtcccgatatcccaaacagctctcagctggactcagataatgacggcatcggagacgac
tgtgatgaagacgacgacaacgacggcatcccggacaatcacgccatcaatggcataggg
cccgataactgcagactcatatccaaccccaaccagaaagactcagacagtaatggagtg
ggcgatgtatgcgagaatgacttcgacaatgattcagtgatggatttggttgacgtgtgt
ccagaaagtgctgaagtcacacttacagatttcagagcctatcagacggtcattctggac
ccggaaggtgacgctcagattgaccccaactgggtggtgctcaatcagggaatggaaata
gttcagaccatgaacagtgaccctggactggcagtgggttatacagcgtttaacggcgtg
gactttgagggaacatttcacgtgaacacagtgaccgacgatgactatgccggcttcatc
ttcggctaccaggattcatctagtttctacgtggtgatgtggaagcagaccgaacagacg
tactggcagtccatcccattcagagccatggctgaaccgggcctgcagctcaaggcagtg
aagtctcgtactggtcctggtgagtttcttcgtaacgctctgtggcatgctggagatact
gatggagaggtgaagctgctgtggaaagacccacgaaacgtcggctggctggataaaaca
tcgtatcggtggcagctcagccatcggcctcaggtcggatacatcagggtgaagctgtat
gagggctcagagatggtggcagactcagatgtggtaatcgacacctctatgagaggaggt
cgtctgggcgtcttctgcttctctcaggagaacatcatttggtccaatctgcgctaccgc
tgcaacgataccgttccagaggacttcagttcacaccgtaagcaggttctgatgcacata
aaggtgtga
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