Danio rerio (zebrafish): 30444
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Entry
30444 CDS
T01004
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein precursor
KO
K11988
sonic hedgehog
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
30444 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
30444 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
30444 (shhb)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C46: hedgehog family
30444 (shhb)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Morphogens
30444 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Vint
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
30444
NCBI-ProteinID:
NP_571274
ZFIN:
ZDB-GENE-980526-41
Ensembl:
ENSDARG00000038867
UniProt:
Q6DBX7
LinkDB
All DBs
Position
2:complement(30050547..30055381)
Genome browser
AA seq
416 aa
AA seq
DB search
MDVRLHLKQFALLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNHW
PGVKLRVTEGWDEDGRHLEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLGDGTRKPIKDLKVGDRVLAADEKGNVLISD
FIMFIDHDPTTRRQFIVIETSEPFTKLTLTAAHLVFVGNSSAASGITATFASNVKPGDTV
LVWEDTCESLKSVTVKRIYTEEHEGSFAPVTAHGTIIVDQVLASCYAVIENHKWAHWAFA
PVRLCHKLMTWLFPARESNVNFQEDGIHWYSNMLFHIGSWLLDRDSFHPLGILHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaatttgctttactgtgttttatcagcttgcttctg
acgccttgtggattagcctgtggtcctggtagaggttatggaaaacgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgttgccgagaaaacgcttgga
gccagcggcaaatacgaaggcaaaatcacaaggaattcagagagatttaaagagctgatt
ccgaattataatcccgatatcatctttaaggacgaggaaaacacaaacgctgacaggctg
atgaccaagcgctgtaaggacaagttaaattcgttggccatatccgtcatgaaccactgg
cccggcgtgaaactgcgcgtcactgaaggctgggatgaggatggtcgccatttagaagaa
tctttgcactatgagggacgggcagtggacatcactacctcagacagggataaaagcaag
tatgggatgctatccaggcttgcagtggaggcaggattcgactgggtctattatgaatct
aaagcccacatacactgctctgtcaaagcagaaaattcagtggctgctaaatcaggagga
tgttttcctgggtctgggacggtgacacttggtgatgggacgaggaaacccatcaaagat
cttaaagtgggcgaccgggttttggctgcagacgagaagggaaatgtcttaataagcgac
tttattatgtttatagaccacgatccgacaacgagaaggcaattcatcgtcatcgagacg
tcagaacctttcaccaagctcaccctcactgccgcgcacctagttttcgttggaaactct
tcagcagcttcgggtataacagcaacatttgccagcaacgtgaagcctggagatacagtt
ttagtgtgggaagacacatgcgagagcctcaagagcgttacagtgaaaaggatttacact
gaggagcacgagggctcttttgcgccagtcaccgcgcacggaaccataatagtggatcag
gtgttggcatcgtgctacgcggtcattgagaaccacaaatgggcacattgggcttttgcg
ccggtcaggttgtgtcacaagctgatgacgtggctttttccggctcgtgaatcaaacgtc
aattttcaggaggatggtatccactggtactcaaatatgctgtttcacatcggctcttgg
ctgctggacagagactctttccatccactcgggattttacacttaagttga
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