KEGG   Danio rerio (zebrafish): 326729
Entry
326729            CDS       T01004                                 
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dre03032]
    326729 (pif1)
   03029 Mitochondrial biogenesis [BR:dre03029]
    326729 (pif1)
Enzymes [BR:dre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     326729 (pif1)
DNA replication proteins [BR:dre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    326729 (pif1)
Mitochondrial biogenesis [BR:dre03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    326729 (pif1)
SSDB
Motif
Pfam: PIF1 Pif1_2B_dom AAA_30 AAA_19 AAA_22 Herpes_Helicase DEAD UvrD_C_2 Mg_chelatase RsgA_GTPase ABC_tran AAA_7 AAA_16 AAA_5 PhoH FhuF
Other DBs
NCBI-GeneID: 326729
NCBI-ProteinID: NP_942102
ZFIN: ZDB-GENE-030131-4928
Ensembl: ENSDARG00000020289
UniProt: Q7ZV90
LinkDB
Position
2:complement(17096850..17114853)
AA seq 639 aa
MLGQMEPAELQCTVAVERLNPAGQAIKRQLIRKGTVTLGRNEFQEMILRVHDGKAPQNFM
LRDFQLFTRFAKDGKCTVKFVPENTQVLVSDCPPDRLKMFLKTLSIKHQASQSSKPLSDR
EKLRAGLPRAFETVSPLQLKDVEKANELRSRVNAPMQPRCLAERPVNKVLGDRKQVKRPR
PDCDASPVKALHPNKKPVLVLPVAQKLSKEQTAVLNAVLSGKNVFFTGSAGTGKSFLLKR
IVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCIELAQRPGVLRHWTSC
KHLIIDEISMVEAEFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKEKANFC
FQSRSWRKCIHMNMELMEVRRQTDKTFISLLQAVRVGRVTEEVTAQLLKSANHCIERDGI
LATRLCTHKDDVELTNENKLKQLPGVVRMYEAVDSDPMLVQTIDAQSPVSRLLQLKVGAQ
VMLTKNLDVQRGLVNGARGVVVDFQPGNQGLPRVRFLCGAVEVMKRERWMFKAPGGLYLS
RQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRV
VQANQDVLIFYKRLRKERLLMQSSMNDFVGQSNKENSRW
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgctggggcagatggagccagccgagcttcagtgcacagtggcggtggagcgtttgaat
cctgcaggtcaggccatcaaacggcagctcatccgcaaaggcaccgtcacattagggcgt
aatgagtttcaggagatgattctgcgcgtccacgacggcaaagctcctcaaaacttcatg
ctgcgcgacttccagctctttacgcgcttcgcaaaggatggcaaatgcactgttaaattc
gtcccggagaacacgcaggtcctggtctccgattgtccgccggaccgtttgaagatgttc
ctgaagacgctcagcatcaagcatcaggcgtcccaaagcagcaagcctttgagtgaccgg
gagaaactgcgagctggtcttcctagagcctttgagacggtcagtcccctccagctgaaa
gatgtagagaaggcaaacgagctgaggagcagggtgaacgccccaatgcaacccagatgt
ctggcagagagacctgtcaataaagttctgggtgaccgcaaacaagtgaaaaggcctaga
cctgattgtgatgctagcccggttaaagcacttcaccccaataagaagcctgtcttggtt
ttgcctgttgcacaaaagctcagcaaagaacaaactgcagttctcaatgctgtcttgagt
ggcaaaaatgtgtttttcacgggcagtgcaggtacagggaagtcattcttgctgaaaagg
attgttggctctctgcctccaaaaagcacatatgcaacagcgagcactggtgtcgcagct
tgtcacataggagggacaacattgcacagttttgcaggtattgggtcgggttctgcacct
cttgaacagtgtattgagctcgctcagcgccccggggtgctgcgacactggacatcctgc
aaacacctcattattgatgagatctcaatggttgaggctgagttctttgacaaactagaa
gccatagccaggtccatcagaagatccacagagccatttggaggcattcaactgatagtg
tgtggagactttcttcaacttccacctgtaacaaaaggaaaggagaaagctaacttctgt
ttccagtcgcgaagttggcggaagtgtatccacatgaacatggagctgatggaagtgcgc
agacaaacagacaagaccttcatttctctcctccaggctgtgagagtgggcagagtaaca
gaggaagttacagcacagctactgaaaagtgccaatcactgcattgagagggacggtatc
ttagcaaccaggctgtgcacacacaaggatgatgtggagctcactaacgagaataaactc
aaacagttaccaggggtcgtgcggatgtatgaggctgtggatagtgacccgatgctggtt
cagacaattgatgctcagagtccagtgagtcgactgctacagctaaaagtgggagctcag
gtcatgcttactaaaaaccttgacgtccagaggggtctggtaaacggagccagaggagta
gtggttgactttcagccaggaaatcaaggactcccccgagtgcggtttctctgtggggca
gttgaggtaatgaagagagagcgctggatgtttaaagccccaggagggctgtacctgagc
cgacagcagctgccactcaaactggcctgggccatttcaattcacaagagtcagggcatg
actctggattgtgtggagatctctttggcgcgtgtgtttgagagcggccaggcttatgtt
gctctgtcacgggctcgcagtctggaaggtttgcgtgtgatggactttgaccctcgagtg
gttcaggccaaccaagacgtgctgattttctataagagactaaggaaagaaaggctcctc
atgcagtcatcaatgaatgattttgttggacagagcaataaggagaactcccgctggtga

DBGET integrated database retrieval system