Danio rerio (zebrafish): 407978 Help Entry 407978            CDS       T01004                                  Symbol cdh23 Name (RefSeq) cadherin-23 precursor   KO K06813   cadherin 23 Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:dre03037]     407978 (cdh23)    04515 Cell adhesion molecules [BR:dre04515]     407978 (cdh23) Cilium and associated proteins [BR:dre03037]  Primary cilia and associated proteins   USH complex and associated proteins    407978 (cdh23) Cell adhesion molecules [BR:dre04515]  Cadherins   Major cadherins    407978 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 DUF5484 DUF4175 Motif Other DBs NCBI-GeneID:  407978 NCBI-ProteinID:  NP_999974 ZFIN:  ZDB-GENE-040513-7 Ensembl:  ENSDARG00000007561 UniProt:  Q6QQE1 LinkDB All DBs Position 13:42762194..43213012 Genome browser AA seq 3366 aa AA seqDB search MSWCEGSGGKMTWVKLLLSLVLLHAVSEASANQPPRFQNYFFQSYLLVYEDTPVGTSITQ LQAVDPDGEPLIFGVVGEEAMRYFAVQGTTGVVWLRQPLDREAKSEMQVEFTVSDSQGVV KDTVNIQIGDVNDNAPSFYNQPYAIQIPENTPVGTSVFMVNATDPDQGVGGSVLFSFQPP SQFFSIDGARGIVTVTRALDYETTIAYQLTVNATDQDKRRPLSSLANLAITITDIQDMDP IFTNLPYSTNIMEDAPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSMFALDYISGSLT VSGQLDRENPLYSSGFIITVKATELNDDRTPSSATVTTTFTILLIDKNDNPPRFNSSEYR VLITELAQVGFALPLYIQVEDKDEGVNSMFQVFLTGNNSDHFSISPTSVQGRADLRLRVA IPLDYETIRSYSFSLYANESLSEHVGFARVFIDLINENDNRPIFSQTLYNISLPESIEPG ASLLQIKATDNDIGTFGVVRYYFSDEPDQFSLDAETGWVTLRGRLDYELMRRFTLTILAR DGGGEETTGRLRINVMDVNDNAPVFQKEAYTGSLMENEQAPQQVIRARATDEDSPPNNIL TYSIIYASQFRSFFSISIAEGYAVITVTRPLDYEQVPGGLIFLTLMAKDGGNPSLNSTVP VIIELIDQNDNPPEFSLPSYIVNIPENIVAGATVLFVNATDLDASREFGQTSLIYSLQGS SQFRLNTRSGEITTTALLDREMKSEYILIVRAVDGGVGPQQKTGIATVNITVLDINDNAP VWRDEPYQANVVEMSPIDTDVITVFAVDPDYGDNGTVVYSINPENPFYTINRNTGKIRTS GAVLDRESQDARSAQLMRTIIISATDRGTPPLRSSASATVFVNLLDLNDNDPAFLNLPFV AEVPEGLPIGSSVFRVQVQDPDEAANGAVTMALQMGMPRLDFRLNITTGILVSTVVLDRE QIGQYYLRIIAYDAGQFPRTSTSTLTITVLDVNDETPTFFPSVYNVSLEESVPRDYLVVR LNCTDNDAGLNAELSYFITAGNQDGKFSVGFRTGVVRTVVGLDRETQASYRLVIEAIDNG PAGGRRTGTATVYVEVLDVNDNRPIFLQNSYETSVLENIPRGTSILQVQATDADQGENGK VLYRILSGNNGQFSMDSLSGLISRGSVALDRETRSSNVLEVEAYNSDLGSMRSTVRVIVY VEDVNDEFPVFTQSQYNRLGLRETAGIGTSVVVVRATDPDTGDGGAVAYSLVSGSDRKFE VDVSTGLLTTVDYLDYETKTSYLMNVSATDQSPPFHRSYCTVYVTLLNELDEAVAFLSAG YEVSLRENIATGTEVVQVKAQSADNLNQLSYRFDPDTSPAALALFKIDSVTGRITVTGLL DRERGDSYTLTVVADDGGPKRGSTVKVSITILDENDNSPEFDITSDLSVNIPEDTAIGKR VAVVLARDKDAGRNGLVNFTLIAGNMQDVFKINTVNNTYGEVYLNAPLDRESVDRYLLKV RAMDNGSPPRYTDVSLTVNIVDVNDNPPVLQSPRGYNVSVSENVGGGTSVLRVVATDRDI GANAMLSYYITAGNQDLTFRMDRMTGEIVTRPSPPDREKQQQYTLTVTVEDDGTPTLSTS TTVWVRIIDENDNAPEFPEEEYVTELREGPNTVGAIIATVTAIDPDEGLNGTIRYAISKG NLAQTFQINSVTGQIVVVSALDYEISNGHYVLTVTATDQCPIPLLRLTSSTTVLVNVIDV NDNPPIFPRPFEGPFEITEGQPGPRVWTVKATDADSGSNGKVEYSITAGDLKNEFVISSV EGELRVRKDIELDRETIAYYNITITAKDLGTPSLNATVVVGILVLDINDNDPILLNLPAN TSVSEGAAVQTFIIQVRAQDSDSGRNALLTYSITAGNSDGAFYINETSGVVQVNRPLDRE RVAEYSLTITVKDNPDNPRIARRDSELLTVTLLDVNDNRPIFSQSSYRGEISENSPTGTT VLILNGPVLAEDKDIGVNAVVSYGLLGTRVDIFSIDSRTGVVSVRGGAVLDREAFSVPRV ELFLVSVDVGGLNSSVPLTITILDVNDNPPVFNPSSFTVRLPENSPTGVVVTQLSATDAD AGSNGWLQYRLDSGAQDRFIVDALSGAVLVGNATLDREERSSYRLVVIATDRGTPSLSGT ATLTVVLDDVNDSRPRFIQPVQTISVNESTPPGVVVATLAAEDPDLKPRLEYYIISVEAK DDGNNAVDGLQQSFGIDFHTGAVFVRNPLNRELVATFEIIVSVHDNASDVIEMSVSVPNA KLTINVLDVNDNAPRFRPFGVANFSESILEGAVPGTTLLSVTAVDPDKGPNGQIIYQLLN LPRGNYIRLEDPSTGKIVANRTVDFEQVQWLNFTVRAQDHGSPPRFTELPVYLRIIDVND NNPVFQQPLYQKSIFEDVALGTIIVSVRATDADSGLFSVIEYGLVDGEGKFGITPTTGDI YILSALDRETKDRYTLTAYARDNPGGSPNNRRENSVQVQLTVLDVNDFRPRFSERVFTTS VFENEPVGTSVITMKATDLDEGENALLTYSLQGPGADAFSLDPDTGLIRSLRLLQSFERF NLTVVATDQGRPPLWGTASLQITVIDVNDNRPIFVRPANGTIMHILEEQPPGLVVYEVFA TDEDEGVNGEVRYSFLQTGAGNRDWENFHIDAVTGVITTAVKLDREKQALYSLVVVAYDL GQPVPYETMQPLQVALSDIDDNEPVFLKPPRGSLPYQSLSVPEHSSPGTVVGNVTGAVDA DEGSNAIVYYFIAGGDTGGNFALSVSGVLRVKKDLDREEIPVYSIIVKASSNRNWTPPKG QRSQRAQVLDPSRDPTLQEVRIFLEDINDQSPRFTKLEYTTGVAADAKVGSDLIRVQAID NDIGNNSLVLYHILSIRYIKLHSNDSEEMGNVFIIGETDGIICTFDLFMAYAPGYFIVEV LARDLAGHSDVALVSIYILRDDQRVKIVINEIPERVRLFQEEFINLLSNITGAIVNTDDV QFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVEKVIQMIDENKEQLRNLFRNYNILDVQP AVTARAPDDLTTLQMAIIILAVLLFLAAMLFILMNWYYRTVHKRKLKAVVAGSTGNQGLM DILDMPNTNKYTFEGANPVWLDPFCRNLELAAQAEHEDDLPEDLSDIADLWNSPARTHGT FGREPQATKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLNVVLDDYLRLKKLFAAR LVTKSTSQGDRSSVTELIQSDLDEDDEERIGGRGTLRFKHKLPIELRGPDGVHAVHGSTG TLLTSDLNSLPEDDQRALARSLEALHADGGLYAERNARTESAKSTPLHRNKGSDTLSESP LEITEL NT seq 10101 nt NT seq  +upstreamnt  +downstreamnt atgtcgtggtgtgaaggttcgggaggcaagatgacgtgggtgaagttgcttctttcctta gtgcttctacacgcagtttctgaagcctccgctaatcagccacctcgtttccagaattac ttcttccagtcgtacctgctcgtctatgaggacacaccagtgggtacctcaattacccag ctgcaggcagtggatccggatggcgagccgctgattttcggtgtggtcggggaagaggcc atgcgctactttgctgtgcagggaacgactggagtagtgtggctgaggcagccgctcgac agagaggccaagtcagagatgcaggtggagttcactgtgagcgacagtcaaggggttgtc aaggatacagtgaacattcagatcggggacgtaaatgacaatgctccatcattttacaac caaccctatgccattcagataccagagaacactccagtagggacgtcagtgttcatggtg aatgcgacagacccagatcaaggagtcggaggcagcgtcttgttctccttccagcctccc tctcagttcttctctattgacggagccagaggaatcgtcactgtgaccagagcgctggac tatgagacaactattgcatatcagctcaccgttaatgccacggaccaggataaacggcgt cctctctctagtctggctaatttggcgattaccatcactgatattcaagacatggacccc atcttcaccaacctcccctacagcactaatataatggaggatgcaccacccggttatgaa gtccgtaagatcagagcgattgatcaggacttgggtcgaccacgtggaattggatataca atcatatcaggtaacaccaacagcatgtttgctcttgattacatcagcggatccctgaca gtgagtggacagctggaccgggaaaacccactgtactcatctggattcatcatcacagtg aaggctacagagctgaatgatgaccgcacaccctcttctgccaccgtcaccaccaccttc accatcctgctgatcgataaaaacgacaatccacccagattcaatagctcagagtatcgt gtcctcatcaccgagctggcacaggtcggcttcgctctgcctctgtacatacaggtggaa gacaaagacgagggggtgaacagcatgtttcaggtgttcctgacggggaataactcggat cacttcagcatttctcccacctcagtgcagggcagagctgacctccgcctgcgtgtggcc atcccgctggactacgagaccatccgcagctacagcttctctctgtatgcgaatgagtct ttatcggagcatgtgggttttgctcgagtcttcatcgacctcatcaacgagaacgacaac cggccgatcttcagccagactctttacaacatcagtcttccagaaagcattgagcctgga gcatctctgctgcagattaaggccacggataatgacattggcacgtttggagtggttcgg tattacttcagcgatgagccagaccagttctcattggatgctgagacgggttgggtgact ctgagaggtcggctggattatgagctcatgcggcgcttcactctgaccatactggcccgg gatggaggaggagaggagaccacaggacgcctccgcattaatgtgatggatgtaaacgac aatgctccggtcttccagaaggaggcgtacacaggctcactcatggagaacgaacaggct ccgcagcaggtcatccgagcccgggcgacagatgaggactctcctcctaataacatcctg acctactccatcatctacgcctctcagttcaggtcattcttcagcatcagcattgcggag ggctacgcagtcatcaccgtgactcgtcctctggattatgagcaggttcctggtggattg atctttctgactttgatggctaaagatggaggaaatccatctctcaacagcaccgttcca gtcatcatcgagctgattgatcagaacgacaacccacccgagttcagcctcccgtcttat atcgtcaacataccagagaatattgttgcaggtgcgacggtgctgtttgtgaacgccaca gatttggacgcctctcgagagttcggtcagacctcgctcatctactccctgcagggcagc tcacagttcagactcaacacacgctcaggagagattaccaccacagctcttctggatcga gagatgaagtctgagtatattctgattgtaagggctgttgatggaggagtgggtccacag cagaagactggcattgctacggtgaacatcactgtcctggacataaacgataacgccccg gtgtggcgggatgagccgtatcaagcaaacgttgtggagatgagtcccatcgatactgac gtcatcactgtgtttgctgtggaccctgattatggtgataatgggacggtggtttattct ataaatccagaaaaccccttttacaccatcaaccgcaacaccggaaagatccgcaccagc ggggccgtgctggacagagaaagccaagacgctcgctccgctcagcttatgaggaccatc attatctccgccactgaccgcgggactcctccactgcgctcttctgccagcgctacagtg tttgtgaacctccttgacctgaatgataacgacccagcctttctcaacctcccgtttgtc gctgaggtgcctgagggacttcctattggatcgtctgtgttcagggtgcaagtccaggac cccgacgaagcagccaatggtgctgtaacaatggcccttcagatggggatgccgaggctg gacttcaggcttaacatcaccacaggaattctggtgtccaccgtagtgctggaccgggag cagatcggccagtattatctgaggattattgcatatgacgcaggccagtttccccgcacg tccacaagcactctcactatcacagttttggacgtgaatgatgagacgcccactttcttc cccagtgtttataacgtgtctctggaggagagcgtaccccgtgattatctggtggtcaga ctcaactgcacggataatgacgcgggtctaaatgcagagctcagctattttatcacagca gggaaccaggatggaaagttcagtgttggcttccgcactggtgtggtgcgaaccgtggtg ggcctggaccgcgagactcaggcctcgtacaggctagtgatcgaagccatcgataacggt ccagcgggcggccggaggacaggcacagctacagtctatgtggaggtgctggatgtcaat gataacaggcctatatttctccagaacagctatgagaccagcgtcctggagaacattccc agaggaactagtatattacaggtccaggccacagatgcagatcagggcgagaatggaaaa gttctgtatcgaattctctctggcaacaatggtcagtttagcatggacagtctgtctgga ctcatcagcagaggaagcgtggctctggacagagagacgcgcagctctaatgtgctggag gtggaggcatataacagtgacctgggcagcatgcgcagcactgtcagggtgattgtgtat gtggaggatgtgaatgacgagtttccagtcttcactcagtcgcagtacaaccgtctgggg cttcgagagactgctgggatcggcacatctgtggtagtggtccgagctacagaccccgac actggggatgggggcgctgtggcctattctctggtctctggctctgatcgtaaatttgag gtggacgtgagtactggtctgctaaccacggtggactatttggactacgagaccaagacg agttatttaatgaacgtctcagccacagatcagtcaccgccattccaccgcagctactgc accgtgtacgtcacgttactcaatgaactggacgaagcggtggcctttctttcagctgga tatgaagtttcactgagagagaacatcgctacaggaacagaggtggtgcaggtgaaggcg caatccgctgataacctgaaccagctgtcgtaccgatttgaccccgacacctcgcctgct gccctcgcgctctttaagattgacagtgtcacgggtcgtatcactgtgacgggactgttg gacagagagcggggcgattcatacacactcactgttgtggctgatgatggaggaccaaaa agaggctccactgtgaaggtgtcaatcaccattctagatgaaaacgacaacagcccagaa tttgacatcacttcagacctgtctgtgaatattccagaagacacagccattgggaagaga gtcgcggtcgttttggcgcgagacaaagacgctggacgaaatggactggtaaacttcacc ttaatcgcggggaacatgcaggacgtgtttaagatcaacacagtcaataatacgtatgga gaggtttacttgaacgcccctctggaccgtgaatctgtggaccgctacctgcttaaagtg cgggcgatggataatggttctcctccgaggtacaccgatgtttcgctgacggtgaatatt gtagatgtgaacgataaccctcccgtactgcagagtcctcgagggtacaacgtcagcgtc agtgagaatgtgggtggtggaacatcagtcctgcgcgtcgtagcaacagatcgggacatt ggagctaatgccatgctctcatactacatcactgctggaaaccaggacctgaccttcaga atggaccgcatgacaggagagatagtgacccgaccgtcacctccagacagagaaaaacag cagcagtacacactcactgtcacggtggaagatgacggcactccgaccttatcaacatcc accaccgtttgggtgcgtataattgatgaaaacgacaacgcaccggagtttccagaggaa gagtacgtgacggagctcagagagggaccaaacactgtaggagccatcatcgccacagtc accgccattgacccggacgaaggactcaatggaaccatccgttatgccatctctaagggc aacctggcacagacctttcagatcaatagcgtaacgggtcagatcgtggtggttagtgcg ctggattacgagatcagcaatggtcactatgtgctgacggtcacagccacagatcagtgt ccgatacccctgctcagactgacctccagcaccacagtcctggtgaatgtgatagatgtc aacgataacccacccatcttcccgaggccatttgagggaccgtttgagatcacagagggt cagccgggccctcgtgtctggaccgtcaaagccacagatgctgattcgggatccaatgga aaagtggagtacagcatcaccgcaggggacctgaaaaatgagtttgtaatctcctcagtt gagggagagttaagagtgaggaaagacattgagcttgacagagaaacaattgcctattac aacatcactattaccgccaaagatttgggaacgccttcgctcaatgctacggtggtagtg gggattctagtgttggacattaatgataatgaccccatcctgcttaacctcccggctaac actagtgtgagtgaaggcgctgcggtccaaaccttcatcatacaagtacgagcacaagac tcagacagtggccgcaatgctctcctcacatacagcatcactgccgggaacagtgacgga gcattttacattaatgagacgtcaggtgtggttcaggtgaacaggccgctggacagagag agagttgctgaatacagcctcaccatcactgtcaaagacaacccagacaaccctcgcatc gcacgcagagactcagagttgttgactgtaactttgctggatgtgaatgacaacaggcct attttcagccagtccagctataggggcgagatcagtgaaaactcacctacaggcactaca gtgctgattctgaacggccccgtgttagcagaggacaaagacattggtgtgaatgcagtg gtgagctacggtctgctgggaaccagagtggacatcttttccattgactcccgcacaggc gtggtatcggtgcgtgggggtgctgtcctggaccgggaggctttctctgtcccgcgggtg gagctgtttctggtctcggtggatgtgggaggtttaaacagcagcgttccactcacaatc accatcctcgatgtaaacgacaacccacccgtcttcaacccatccagtttcactgtacgc ctgcctgagaacagccccacaggtgtagtagtaacccagctctctgccactgatgctgac gctggttctaacggttggctgcagtatcggttagacagcggtgctcaggatcgttttatt gtcgatgctctctctggtgctgttctggtgggcaatgctacactggacagagaggaacga agctcataccgtctggttgtaatagcgactgatcgaggcacaccttcactctcagggacc gcaacattaactgtggttctggacgatgtcaacgactcgcgtcctcgtttcatacagccc gtccagaccatcagtgtcaatgagtccactccacctggtgtagtcgtggctacgctagcc gcagaggatcctgatttaaaacctcgtctggagtattacatcatctctgtggaagcaaag gatgatgggaataatgcagtggatggtctacagcagtcgtttgggattgactttcacaca ggtgctgtgtttgtacgaaaccccttgaaccgagagctggtcgccacttttgagataata gtttcagtgcatgacaacgccagtgatgttattgaaatgtcggtcagtgtaccgaatgcc aaactgaccataaatgtgctggatgtgaatgacaatgctcctcgtttccgtcctttcggt gtggcgaacttttccgagagcattctagagggtgctgtgcctggtaccacactgctgtca gtcacagctgtggatcctgataaaggacccaacggacagatcatctaccagctcctaaac ctgcctcgtggaaactacatcagacttgaagacccatctacaggtaaaattgtggccaat cggacggtggattttgagcaagtgcagtggttgaacttcacggttcgtgctcaggatcat ggctcgcctcctcgcttcactgagcttcctgtctatctacgcatcattgatgttaatgac aacaacccagtttttcagcagccgttatatcaaaagtcaatatttgaggatgttgcactc ggcactattatagtgagcgtgagagcgacagatgcagactccggcctgttctctgtcatt gaatacgggctagtagatggcgagggcaaatttgggatcactcccactacgggtgacatc tacatcttatccgctctggacagagaaaccaaagaccgctacactctcacagcctacgcc agggacaatcccggcggcagccccaataaccgcagagaaaactctgttcaggtgcaattg acagtgctggatgtcaatgatttccgtccacgtttctcagagagagtcttcaccactagt gtgtttgagaacgagccggttggcacatcagtgatcactatgaaggccactgacctcgat gaaggggagaatgcattactcacttacagtctacagggccctggagcggacgcgttctct ctggatcctgacactgggctgattcgctctctgcggttactgcagagtttcgagaggttc aatctgacggtggtggcgactgatcaaggcagacctcctctctgggggaccgccagtctt caaatcactgtcatagacgtcaacgacaacagaccgatctttgtgcgcccggccaatggc accattatgcacatactagaggaacagcctcctggactggtagtctatgaagtgtttgcc acagatgaggatgaaggggtgaacggagaggttcgctacagtttcctgcagaccggagct ggaaacagagactgggagaacttccatattgacgctgtgacaggagtgatcactactgcg gttaagctggacagagagaaacaagccctgtacagcctggttgtggtggcgtatgaccta gggcagcctgtcccttatgagaccatgcagccactgcaggtggctctgtctgacattgat gacaatgaacctgtcttccttaaacctccgagaggaagtttgccgtatcagtctctgtct gtaccggagcactcttctcctggaactgttgtgggtaatgtgactggagcagtggatgca gacgaaggctctaatgccatcgtctactacttcatcgcaggaggtgacaccggtggaaac tttgctttgagtgttagtggtgttttacgggtcaagaaagatctggatcgggaagaaatc ccagtgtactccatcatcgttaaagcctcaagtaaccgcaactggactcctccgaaaggt cagaggtcacagcgggctcaggtgcttgaccccagccgtgaccccacattacaggaggtg agaatcttcctggaggacatcaatgaccagtcaccaagattcacgaagctggagtacacc acaggtgttgctgcagatgctaaagtgggatcggatctgatccgggttcaggccattgac aatgacattggcaacaacagtctggttctctatcacattctgtccatccgctacatcaaa ctgcactccaatgactctgaagaaatgggaaacgtcttcatcatcggtgagactgacgga atcatctgcacgtttgacctctttatggcttacgctccgggttattttatcgtggaggtt ttggcaagagatctggccggacacagcgacgtagctctggtgagcatttacattctgaga gacgaccagcgggtgaaaatcgtcatcaatgagatcccagagcgagtccggctctttcag gaggagttcataaacctgctgtccaacatcacaggagccatagtcaacactgatgatgtg cagttccatgtggataaaaaaggaagagtgaacttcgctcagactgatgtgctgattcat gtggtcaacaagcagaccaaccgtattctggatgtggagaaagtgattcagatgatcgac gagaacaaggagcagttgaggaatctttttcgaaactacaacattcttgatgtccagcct gctgtaactgcacgcgcaccggatgacctcaccacattacagatggccatcatcattctg gcagttttactctttcttgctgccatgttgtttatcctgatgaactggtattaccgcaca gtgcataaaaggaagctgaaggcagtagttgcaggctccacaggaaatcagggcttgatg gatattctggatatgcccaacactaacaagtacacgtttgaaggagcaaatccagtgtgg ctggaccctttctgcaggaatctggagttagcagcccaggcggagcacgaggacgacctt cctgaagacctgagtgacattgcagacctctggaacagcccagctcgaacacatggtaca tttggacgggagcctcaggccactaaaccagaggatgaccgatatctacgagctgctatt caggagtatgacaacattgccaaactagggcaaatcatgagagaagggcccattaagggc tcgctgctcaatgtggttttggatgactacctgagactcaaaaagctgtttgccgctcgc ctggtcaccaagtcaaccagccagggtgaccgctcatcagtcacagagctgattcagagt gacctggatgaggatgatgaagagcgcatcggcggtcggggaacccttcgcttcaagcac aagctcccgatcgagctcaggggtcctgatggggtacacgcggtgcacggcagcacgggc acactgttaacctctgacctcaacagcctgcccgaagatgaccagcgggctctggctcgt tccctcgaagccttgcatgcagacggcggcctgtacgccgaacgcaacgcccgaacagag tccgccaaatcaacaccgttacacagaaacaaaggcagcgacaccctgtctgaaagtccg ttagagatcacagagttatga

DBGET integrated database retrieval system