Danio rerio (zebrafish): 436798
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Entry
436798 CDS
T01004
Symbol
rpp38
Name
(RefSeq) ribonuclease P protein subunit p38
KO
K14523
ribonucleases P/MRP protein subunit RPP38 [EC:
3.1.26.5
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
436798 (rpp38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
436798 (rpp38)
03016 Transfer RNA biogenesis [BR:
dre03016
]
436798 (rpp38)
03029 Mitochondrial biogenesis [BR:
dre03029
]
436798 (rpp38)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
436798 (rpp38)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
436798 (rpp38)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
436798 (rpp38)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
436798 (rpp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
436798
NCBI-ProteinID:
NP_001002525
ZFIN:
ZDB-GENE-040718-258
Ensembl:
ENSDARG00000040350
UniProt:
F1QS85
LinkDB
All DBs
Position
16:complement(28592495..28594188)
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AA seq
265 aa
AA seq
DB search
MSTPAKGATKKEKKKPIPVKTSLNNPYNIGWSDLLQKQHKHLILDTLKEKLSATGLRKER
VSRFRDWGSRRRSRKKASKPTEEQNPASEPAESVQTPEPGWTNLALRKQLAIGINEVTKG
LERNELSLVLVCNSVTPAHMTSHLIPLSKTRSVPACQVPGLSGSLSELLGLKCVLALGFR
RGSEEFENTVRAITPMVPQLPVAWIQTDSTPTTKEKRTEIGQKRKLEELSSDASPLVLQP
LKVKKIIPNPTKIRKPKLKKQKKVV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccagcgaaaggagcaacgaagaaagaaaaaaagaagccgataccagtcaaa
acatccctgaataacccgtacaacattggctggagtgacctcttacaaaaacaacacaaa
catttaatacttgacactctgaaagaaaaattatccgccaccgggcttcggaaagagcgt
gtcagccggtttcgcgattggggaagcagaaggaggtccagaaaaaaggcatcaaaaccc
accgaagagcaaaacccagcttctgaacccgcagagagcgtgcaaacccccgagccgggc
tggaccaatctggccctgaggaaacagctcgccatcggcatcaacgaggtcaccaagggc
ctagaaaggaacgagctgagtttggtgctcgtgtgtaactcggtcaccccagctcacatg
acgagccatttaatcccgctgagtaaaaccaggtcggtgcccgcctgccaggtacccggt
ttgagtggaagcctgtcggagctgctcggcctcaagtgcgtcctggcactgggcttcaga
cgcgggtccgaggagttcgagaatacggtccgcgccatcacaccgatggtcccacagctc
cccgtggcgtggattcagacagactcaacaccaacaaccaaagaaaagcgcacagaaatc
ggacagaagaggaaactagaagagctgtcgagtgatgcatctcctttggttctccagcct
ctaaaagtaaagaaaatcattccgaatccaacgaaaattaggaaacccaaactgaaaaaa
cagaaaaaagttgtttaa
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