Danio rerio (zebrafish): 560305
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Entry
560305 CDS
T01004
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X2
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
560305 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
560305 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
560305 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
FYVE_2
zf-RING_5
IBR
Motif
Other DBs
NCBI-GeneID:
560305
NCBI-ProteinID:
XP_017212897
ZFIN:
ZDB-GENE-081104-33
Ensembl:
ENSDARG00000100402
UniProt:
A0A8M6Z0K6
LinkDB
All DBs
Position
8:7669627..7778210
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AA seq
977 aa
AA seq
DB search
MQLNRPKSAHLISSSPHNSSSYSSQFKSMRFSYHISSGLPSPQPALRRTGPCLGAHETPQ
RLCSDPGPLEPQHCNGTSENGPQDVPPPPPKTRPPLPGPKPQVPPKPPHLQQQNARRPRP
PDKPLPPPPPSRPLPADPRQSRATMPRAEGSSSPTCVLSLIEKFEREQIIVVPDITGGVM
CTPRVPDQQATPGSLSPQTSEFILPCTSLQEPLEAPLAEDELEKEEKEEEEEEDVDETEE
DDSELGASCSDKRLSMESGYGASDKLLDNMEMTANQSEIPSDRLSLPPAQMDGKLANRDS
GIDSISSPSHSEELCFVGDEDRVGHEREICPCSPGPGISCSYVEGPDEEGAGGEEAGRDS
EGDSDLEEGSGDESEMNPMALQPLPKAERQDSTEMSVQQRVFNIANELLHTEKAYVSRLH
LLDQVFCAQLMEEARARSSFPCEMVMGIFSNICSIYCFHQQFLLPALEKRMEEWDLNPRI
GDILQKLAPFLKMYGEYVKNFDRAMELVNTWMQRSSQFKTIIHNIQKEEMCGNLTLQHHM
LEPVQRIPRYELLLKDYLHRLPEDADDFKDAQKSLELIATAAEHSNAAIRKMERMRKLLK
VYELLGGEEDIVNPTNELIKEGHILKLSAKNGTSQDRYLILFNDRLLYCVPKLRLIGQKF
GVRARIDVDGMELKETSSMNVPRTFLVSGKQRSLELQARTEEEKRDWIQAIQATIQRHEQ
TLETFRMLNCSFREEDLTPPNSPNCSELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHH
CKACGHVVCGKCSEFRARLLYDNNRANRVCIDCYTMLVGVPPSPASLSSSTQRRRSILEK
QASVAAENSVLCSFLHHMEKGSGRGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSLPLIG
FEVSLPESGDRLERRFAFKMSQSHLTVYFSADCEELQRRWMEVLSRAGRGEELQSNGPIC
EALEEEGEEPAPTGEST
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaatcgacccaagagcgcgcatctcatcagctccagtccgcacaattcgtct
tcctattccagccagttcaaaagcatgcgcttctcataccacatcagcagcgggttgccc
agtcctcagcctgccctgcgcagaacaggcccctgcctcggagcccacgagaccccacag
cgcctctgctctgaccccggacccttggaaccgcagcactgcaatggcacaagtgagaac
ggccctcaggacgtcccacctccacctcccaaaacacggccacctttacctgggccaaag
cctcaagtgcccccgaaaccccctcatctacagcagcagaacgctcgacggccccgcccc
ccagacaagcccctcccaccgccaccaccatcccgcccactgccagccgacccccgccaa
tcacgtgccaccatgccgagggcagagggaagctcctcccccacttgtgtcctttcgctc
atcgagaagtttgagagggagcagataattgtggtgccagatatcactgggggcgtgatg
tgtaccccgcgggtcccggatcagcaggccactcctgggtcacttagtcctcaaacatca
gagtttatcctgccctgcacatcccttcaggaacctctagaggcgccgctggcagaggac
gagcttgagaaagaagaaaaagaggaggaagaagaagaagatgtagacgaaactgaagaa
gatgacagcgagcttggggcgtcctgctcagataagcgtctttccatggaatcaggctac
ggcgcttcagataaactgctggacaacatggagatgacagccaaccaatcagaaatcccc
tctgaccgattgtccctccccccagcgcagatggacgggaagctggccaatcgggacagc
ggaatcgacagcatcagctcgccttcacacagcgaggagctctgctttgttggggacgag
gatcgggtcggtcatgagcgggagatttgtccgtgtagcccaggaccagggatttcatgt
agttatgtggagggtcccgatgaagagggggccggcggggaggaggctggcagagactca
gagggagacagtgatctggaggagggcagtggagacgagagcgagatgaaccccatggct
ctacaacctctgcccaaagctgaacgacaagactccactgagatgtcggtccagcagcgg
gtgttcaacattgctaatgagctcctgcatacggagaaggcgtatgtgtccagactgcac
ctcctggaccaggtgttctgcgctcagctgatggaggaggctcgagcccgcagctccttt
ccctgtgagatggtcatgggcatcttctccaacatctgctccatctactgcttccaccag
cagttcctgctgcccgcgctggagaaacgcatggaggaatgggatctgaacccccgcatc
ggggacatcctgcagaaactggcgcctttcctgaagatgtacggcgagtatgtgaaaaac
tttgaccgggcgatggagctggtgaacacctggatgcagcgctcatcccagttcaaaacc
atcattcacaacatccagaaagaggagatgtgtgggaatctcaccctccagcaccacatg
ttggagcctgtgcagcgaatccctcgctacgagctgctgctcaaagactacctgcaccgg
ctgccagaggacgcagacgacttcaaagatgcccagaagtctctggagctgatcgccact
gcggcagaacactcaaacgctgccatcaggaaaatggagcgcatgagaaagctgttgaaa
gtgtacgagctgcttggaggggaggaggatatcgttaatcccactaatgagctgattaaa
gagggacacatcctcaaactgtcagctaaaaatgggacgtcgcaggatagatacctcatt
ctgttcaatgacaggttgctgtactgcgtccctaaactgaggctgataggacagaaattt
ggagtgcgagcacggattgatgtggacggcatggagctgaaggagaccagcagcatgaac
gtaccgcgaacgtttctggtgtctggaaaacagcgctcgctagaactgcaagcaaggacg
gaggaagagaagagggattggattcaggcaatccaagccactatacagagacatgagcag
acgctggagaccttccggatgctcaactgctcttttagggaggaggatttaactcctcca
aactctccgaattgctcagagcttggaaagcgagcgcccactccgatccgggagaaagaa
gttacgctgtgcatgaagtgtcaggagccgttcaactccatcaccaaacgacgccatcac
tgcaaagcctgcggacatgtggtgtgtggaaagtgttcagagtttcgtgcccggctgttg
tatgataataaccgagccaaccgtgtgtgtatagactgttataccatgctagttggagtg
ccgccgtctcctgccagtctgagcagcagcacacagagacgacgctccatcctagagaag
caggcctcggtggcggctgaaaacagtgtgctgtgtagtttcctgcaccacatggagaag
ggtagtggccgtggttggcagaaggcctggttcgtcatccctgaaaatgaaccactggtg
ctgtatatctatggtgctccacaggatgtcaaagctcagcgcagtctccccctcatcggc
ttcgaggtgtccttacctgaatccggtgaccgcctggaacgccgcttcgccttcaaaatg
agccagagtcatctgacggtttacttcagcgccgactgtgaggagctgcagcgccgctgg
atggaggttttatcccgagccggcaggggcgaagagctacaatccaacgggcccatttgt
gaagccctggaggaggagggggaggagccagcgcctacaggagaaagcacatga
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