Danio rerio (zebrafish): 792513
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Entry
792513 CDS
T01004
Symbol
si:dkey-225n22.4
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X2
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
792513
NCBI-ProteinID:
XP_009295483
ZFIN:
ZDB-GENE-120709-30
UniProt:
A0A8M3AP12
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Position
24:196657..257438
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AA seq
507 aa
AA seq
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MKPSRDLQDPRDLQEHGVFEERKEGKDPRAQMGPPGLRGEPGYVGPPGPKGDVGLSGPRG
DPGLQGFKGDQGDQGLPGRPGPPGPMGASKPSIGIAGLPGEKGAQGGKGEQGPPGKPGLM
GVPGIPGNEGPPGPAGAQGEKGDDGPPGAAGPQGPPGIRGLSGEAGATGEQGARGAPGPK
GSPGPRGAQGAQGPSGTPGADGARGPKGSAGETGGAGAPGAAGQKGQQGESGFPGAQGAT
GLPGFKGHKGERGESGPRGAQGEKGTKGFPGLPGFTGETGPRGIKGERGSPGDPGLKGPD
GQKGDMGHIGVVGPRGFPGQDGLPGQPGNPGFPGKPGKPPSDEYFIKLCRDVLRNQLPQL
LQTMSSQRCEPCETIKGPPGHPGAPGPKGSIGSPGYPGRHGAQGYPGPPGVQGPPGVKGD
TGIQGFKGKKGESRPGYPGPPGDTGIQGPRGSDGIGFPGPPGIPGKSGSPGIPGKQGPPG
QAGVCDMSICYQSYNLREERYSKGPDF
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccagccgggacctccaggacccccgggacctccaggagcacggggttttcgag
gagagaaaggaagggaaggacccccgggcccagatgggacccccggggttgagaggagag
ccaggttatgtaggtccaccagggccgaagggtgacgtgggtctatcagggccgagaggt
gatccaggactgcagggtttcaaaggcgatcagggagatcaagggctgcctgggagacca
gggccgccggggccgatgggagcatcaaagccgagcattggtatagctggactaccagga
gaaaagggagcgcaggggggaaaaggagaacaaggacctcctggaaagcctggtctaatg
ggggtcccgggcatcccagggaatgaaggacctcctggacctgctggagcacagggagag
aaaggagatgacggaccccccggtgctgctggacctcaggggcctcctggcattcgtgga
ctttcaggtgaagcaggagcgaccggagagcagggtgcacgaggagctccaggaccgaaa
ggctccccgggaccaagaggagctcagggggcgcaggggccttcagggacccctggagca
gacggagctcgcggccccaagggcagtgcaggagagacggggggcgcaggtgctcctgga
gctgcgggtcagaagggccagcagggagagtcgggattcccaggagctcagggagccaca
ggccttcctggatttaaaggacacaagggtgagagaggagagtcgggacccagaggcgct
cagggggagaagggcaccaaaggtttccctggattgccgggatttacaggtgaaacggga
cccagaggcattaaaggagagagaggctcgcctggtgaccctgggctcaaaggtccagac
gggcagaagggggacatggggcacattggtgttgtcggaccgcgtggattcccaggtcaa
gacggtttaccaggacaaccaggcaatccaggctttccaggaaaacctgggaagcctccg
tcagacgagtacttcataaaactctgcagggacgttctgagaaaccagctcccacagctc
ctgcagaccatgagctctcagcgctgtgaaccctgcgagaccattaaaggacccccggga
caccctggagctccgggtcctaaaggctccatagggtctcctgggtatcccggcagacac
ggtgctcagggctaccctgggcctccaggagtgcaggggccaccaggagtcaaaggggac
acaggcatacagggattcaagggcaaaaaaggagagagccgaccaggatacccaggacct
cccggagacacgggcatccagggtcctcgcggcagtgatggcattggttttccgggtcct
ccgggaataccgggtaaatctgggtctccgggcatcccaggaaagcagggtcctccaggg
caggccggtgtgtgtgacatgtccatctgctaccaatcctataacctcagggaggaacgc
tacagtaaagggccagatttctaa
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