Dinoroseobacter shibae: Dshi_1645
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Entry
Dshi_1645 CDS
T00612
Symbol
rsmB2
Name
(GenBank) rRNA (cytosine-C(5)-)-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_1645 (rsmB2)
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Dshi_1645 (rsmB2)
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dshi_1645 (rsmB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
ABV93387
RoseoBase:
Dshi_1645
UniProt:
A8LLK9
LinkDB
All DBs
Position
complement(1708348..1709526)
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AA seq
392 aa
AA seq
DB search
MTPAARVQGAIEILEAYLSGQSAEQALSRWCRSHRFAGSKDRAALRDLVFDALRCRASYA
WLGGGLSARGLMVGALRKRGLAPEDLFNGQTYAPFPVTGDEIAQFGQAENMPDDVALDMP
GWLFAQLQDSFGEAALGVCAALQQRAPVDLRVNTLKASVGQAEEALYEDGIATERVAGVA
TALRVVEGARSVVRSRAFTDGLVELQDAASQLAVLRSPVPHKGRILDFCAGGGGKALALA
AGSGGCIHVHDANLKRMRDLPDRAARAGADLRMWNRAEARAFDLVFCDAPCSGSGTWRRS
PEAKWTLTPDRLAEYVATQRTVLTAAAPLVRPGGFLVYATCSILTVENAAQTAWFLQAFP
AFSLLEASQMLPENPGDGFYFGILRNERSTKG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgccgcgcgggtgcaaggcgccatcgagattctggaggcatatctctcgggg
cagtctgcggagcaggccctgagccgttggtgccggtcgcatcgttttgcaggctccaaa
gaccgtgccgctttgcgcgatctcgtgttcgatgccttgcgctgtcgggcgagttacgct
tggcttggcggtggtctgagcgcgcgaggcttgatggtcggcgcgcttcgaaagcgcggg
ctggcgcccgaggacctgttcaacggacaaacctacgcaccctttccggtgaccggggac
gagatcgctcaattcggccaagccgagaacatgccggatgatgtggccctggatatgccg
ggctggctttttgcccagctgcaagacagctttggcgaagcagcattgggcgtgtgcgcg
gccttgcagcagcgtgccccggtggatttgcgggtcaataccttgaaggcatctgtgggg
caggcagaagaagccctttatgaagacggaatcgcgactgaacgggttgcgggcgtggcg
accgctcttcgggtcgtggagggcgctcgcagtgttgtcaggtcgcgcgcctttacagac
ggccttgtggagttgcaggacgccgcctcgcaactggccgttttgcgcagccctgtacct
cacaagggacgcattctcgacttttgtgccggtggtggcgggaaagcgttggccctcgcg
gcaggaagtggggggtgcatccatgtgcacgacgcaaacctcaaaaggatgcgggacctg
ccagatcgggcagctcgtgcaggggcagacctgcgaatgtggaatcgcgcggaggcgcgc
gcgttcgaccttgtattctgtgatgcgccatgttcgggcagcggcacctggcggcgctca
cccgaggccaagtggacgctgacgccagaccggcttgcagagtacgttgcaacccagaga
accgtactgaccgccgccgcacccctggtgcggccgggcggtttcctcgtttacgcgacc
tgctcaatactgacggtggaaaatgccgcgcagactgcttggttcttgcaggcgtttccc
gcattttcgcttctggaggcatcgcagatgttgcccgaaaacccgggggacggattctac
ttcggtatccttcggaatgaacgctcaaccaaaggttga
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