KEGG   Dinoroseobacter shibae: Dshi_3215
Entry
Dshi_3215         CDS       T00612                                 
Symbol
cse1
Name
(GenBank) CRISPR-associated protein, Cse1 family
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dsh02048]
    Dshi_3215 (cse1)
Prokaryotic defense system [BR:dsh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Dshi_3215 (cse1)
SSDB
Other DBs
NCBI-ProteinID: ABV94948
RoseoBase: Dshi_3215
UniProt: A8LM39
LinkDB
Position
3384277..3385797
AA seq 506 aa
MPVNLLSDPIFSAEGGRRLNLPGLFAALACDEVRGFPRLRAHQRAAWHMFRVQLAALALD
KAGRAEPPQDEADWHALLVALTEGVAGPWDLTGPDRTKPAFLQPPDPGGLKWEPVATPDA
LDLLITSRNHDLKSEIAAQAAPEDWVYALISLQTSEGYGGRGNFGIARMNGGSSSRAMLG
LAPAGPDGRPDPASWWRRDLALVLRNRNAPTLLTRGGKALLWTLPWPEGRQIPALEMDPL
AIEVCRRIRLVARDGTVVAERAASKAARVEAKAFNGVLDDPWAPVNVKDATPKTLTLGEG
GRFHYRRMVDLLTGGYWQLPLAARLDEGEVAGNMVLVAEALARGNSKTDGLQSRNVPMPK
RVRGLADIRNRIARAAQEQMAEIAAADAALREAVALYAARGDFETVGKPQRQRAAAARER
LDATADRIFFDHLWARIAGMDEGDDALAEARANFRAVLVTTARDELTRAFDAIPCARIHA
PRARIRARGRLEGALRKANLLEVTHA
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgccggtgaaccttctttccgatccgatcttttccgccgaagggggcaggcgtcttaac
ctacccggcctcttcgcggcgctcgcctgtgatgaggtccgcggtttcccccgcctgcgc
gcccatcagcgcgccgcctggcacatgttccgcgttcagcttgccgctctggccctagac
aaggccgggcgcgcggagccccctcaggatgaggccgactggcacgccctgttggtcgcg
ctgacagaaggtgtcgctgggccatgggatctgaccgggcctgatcgcaccaagccggcc
tttctccagccaccggatccgggtgggctgaaatgggagccggttgcgacgccggacgcg
ctggacctgctgatcacatcgcggaaccacgacctgaaatcggagattgcggcgcaggcg
gcgccagaggactgggtgtacgcgttgatctccctccagacctccgagggctatggaggg
cgcggcaactttgggattgcgcggatgaatggcggctcatccagccgtgcgatgttgggt
cttgctccggccggtccggacggacggccggacccggcatcctggtggcggcgcgacctg
gcgctggtgttgcgcaatcgcaatgcgccaaccctgctgacccgcggcggcaaagccctg
ctctggacgctgccctggcctgaggggcgtcagatcccagcgctcgagatggacccactc
gccatcgaggtctgccgccgcatccggctggttgcgcgggacggcaccgtcgtcgccgaa
cgcgcggcatcaaaagcggcacgggtggaggcgaaagccttcaacggggtgctcgacgat
ccctgggcgccggtgaatgtcaaggacgcgaccccgaaaaccctgacgcttggtgagggg
gggcggtttcactaccgacgcatggtcgatctgctgaccggaggctactggcaactgccg
ctggcggcccgcctcgatgaaggggaggtcgccgggaacatggtgctggtcgccgaggca
ctagcgcggggtaactccaagacggacggcttgcagtcgcggaatgtgccgatgccgaaa
cgggtgcgtggtcttgcggacatacgcaaccgaatcgcgcgggccgcgcaggagcagatg
gccgaaatcgccgcggccgatgcagctctgcgcgaagcggttgcgctttatgcggcccgc
ggcgatttcgagactgtggggaaaccgcagcgtcagcgggcggcggcggcccgcgagcgc
ctggatgccaccgctgaccggattttcttcgaccatctctgggcgcgtatcgccgggatg
gatgagggcgatgatgcactggccgaagcccgggccaacttccgtgccgtactagtgacg
accgcccgcgacgagctaacccgggccttcgacgcgatcccctgcgcgcgcatccacgcc
ccccgcgcccgcatccgcgcccggggccgactggagggcgcgctgcgcaaagccaacctg
ttggaggtcacccatgcctga

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