Dichomitus squalens: DICSQDRAFT_50584
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Entry
DICSQDRAFT_50584 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DICSQDRAFT_50584
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsq01007
]
DICSQDRAFT_50584
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsq03016
]
DICSQDRAFT_50584
Enzymes [BR:
dsq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
DICSQDRAFT_50584
Amino acid related enzymes [BR:
dsq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DICSQDRAFT_50584
Transfer RNA biogenesis [BR:
dsq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DICSQDRAFT_50584
Prokaryotic type
Other AARSs
DICSQDRAFT_50584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
AHSP
Motif
Other DBs
NCBI-GeneID:
18842263
NCBI-ProteinID:
XP_007361732
JGI:
50584
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MSFPPHNLSAPFNFAKEEEKVIAYWREIDAFQTSLKLSEGKPEFTFYDGPPFATGLPHYG
HLLAGTIKDIVTRHAHASGHHVIRRFGWDTHGLPVEHEIDKKLGITSRDDVMKMGLDKYN
DECRAIVMRYASEWRHTVERMGRWIDFDNDYKTLNTSFMESVWWAFKQLHEKGQVYRGLR
VMPYSTGCTTPLSNFEANLAYKDVNDPAVTVAFPLVDDRSTSLLAWTTTPWTLPSNLGLC
VNPDFTYIKIHDEERDQNFIIYEGLLKTLYKDPKKAKFKKLASYKGVDMKGWRYVPLFEY
FTEQFEDRAFRVLNDQYVKADEGTGIVHQAPAFGEDDHRIAIAHGVLRPEDMPPCPIDDA
GRFTSQVPDFQGQHVKAADKEIQKVLKAKGRLIVQSTVNHSYPFCWRSGTPLIYRAIPAW
FVRVQPIVDQLVANNSATRWVPQHVGDGRFGNWIANARDWNVSRNRYWGTPIPLWASEDM
EEIVCVGSVEELETLSGVKGITDLHRDKIDHITIPSKKGKGQLKRVEEVFDCWFESGSMP
YASNHYPFENKELFENTYPGDFVAEGIDQTRGWFYTLLVLGTHLFGKAPWKNLIVYGLVL
AEDGRKMSKSLKNYPDPIHIINQYGADATRMFLVNSPIVRGDNLRFREAGVREVVSRVLL
PWLNSFRFFLGQAALLQKTTGRRFVYHAHAKLSSNVMDRWILARCQSLIRLVREEMAAYR
LYTIIPRLLDLVDELTNWYIRFNRRRLKGEDGEEDTVAALNTLFETLLTLCQTMSSYTPF
LTENIYQGLREFIPEAPKAGDVRSIHFLPFPEVKEEYFDEVIERRVKRMQTVIELTRAVR
ERHNLSLKTPLQELLVFHADPQYLEDVKELERYVQSELNVRDIVFTSDEAAAGVKYRAVA
DWAVLGRKLRKDLGRVKNALPNVPSDGVRKYVETGKLTVDGIELVAGDLAVQRYIELPEQ
AQGGDATHATNTDNEVVVRLDVTVHPELQTEYLAREFINRVQKLRKRAGLQATDDVDVYY
AFEEGAGDDLRAAVEAYAETIQKTTRSVPRSVSERGTDRKVLTEEEQEIADVKFTLSLAW
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttccaccgcacaatttgtctgcgcctttcaacttcgccaaggaggaagagaag
gtcatcgcatactggagagagatcgatgccttccagacaagtctgaagctctcggaagga
aagcccgagtttacgttctacgacggacctccgtttgctactggtcttccgcactacgga
catttgcttgcagggacgatcaaggacatcgttacaagacatgcacatgcgagcggacac
catgtcatccgccgttttggctgggatacccacggtctccccgttgagcacgagatcgac
aagaagctcggcatcacctcccgcgacgatgtcatgaagatgggtctcgacaaatacaat
gatgagtgccgtgccatcgtcatgaggtacgcttccgaatggcgccacaccgttgagcgt
atggggcgctggatcgacttcgacaacgattacaagacgttgaacacgagcttcatggaa
tccgtctggtgggcgttcaagcagctgcacgagaagggccaggtctaccgcggtctccgc
gtcatgccgtactctactggatgcacaactcctctctctaatttcgaagcaaacctggca
tacaaggacgtcaacgatcccgcggtgaccgtcgcgttcccccttgtagatgaccgctct
acctcgcttctggcgtggacgaccaccccctggactctcccgtcgaatcttggactctgt
gtgaatcccgattttacctacatcaaaattcacgacgaggagcgtgaccaaaacttcatc
atctacgagggtctgctcaagacgctgtacaaggaccccaaaaaggccaaattcaagaag
ctcgctagctacaaaggtgtggatatgaaaggctggagatatgtcccgttgtttgagtac
ttcacggagcagttcgaggacagggcgttccgtgtcttgaatgaccaatatgtcaaagcc
gacgagggcaccggcatcgttcaccaggctcccgccttcggtgaggacgaccatcgtatc
gccatcgcgcacggcgtcctgcgtcctgaggacatgccgccttgtcccatcgatgacgcc
ggtcggttcacgtcgcaagtcccggacttccaaggccagcatgtcaaggctgcggacaag
gagatccagaaggtgctgaaggcgaagggacgtctcatcgtccagtccactgtgaaccat
tcatatcccttctgctggaggtccggcactcccctcatctaccgggccatcccagcatgg
ttcgtccgcgttcagcctatcgtcgaccagctcgtcgccaacaacagcgcgacgcgatgg
gtaccgcagcatgttggtgacggccgctttgggaactggatcgctaacgcgcgcgactgg
aacgtctcgcggaatcggtactggggcacgcccatccctttgtgggccagcgaggacatg
gaggagatcgtctgcgtaggatccgtggaggagctggagacgttgtccggggtcaagggg
atcaccgacctccaccgcgacaagatcgaccacatcaccatcccgtcgaagaagggcaag
ggtcagcttaagcgggtcgaggaagtcttcgactgctggttcgagtcaggtagtatgccc
tatgcgtccaatcactatcccttcgagaacaaggagctgttcgagaatacataccccggg
gacttcgtcgcggagggcatcgaccaaactcgtggatggttctacaccttgctcgtgctt
ggaactcacctctttggcaaggcgccatggaagaacctcattgtttatggtctcgtgctt
gcagaagacggccggaagatgagcaagagtttaaagaactaccccgacccaattcacatc
atcaatcagtacggcgcggacgcgacacgcatgttcctggtgaactccccgatcgtccgc
ggcgacaaccttcgcttccgcgaggcaggcgtccgcgaagtcgtctcccgcgtcctcctc
ccctggctcaactccttccgcttcttcctcgggcaggccgccctcctccagaagacgact
ggccgtcggtttgtctaccacgctcacgcgaagctctcgtctaacgtcatggaccgatgg
atcctcgcgcgttgccagtcactcatccgcctcgtgcgcgaggagatggcggcgtaccga
ttgtatacgatcatcccacgtttactcgacctagtggacgagctgacgaactggtacatc
cgcttcaaccggagacgactgaagggggaggatggcgaggaggatactgtggctgctcta
aacaccctcttcgagacgctgcttacgctgtgccagacgatgtcctcatacacacccttc
ctgactgagaacatttaccagggtcttcgagagttcatccccgaggcccccaaggccggc
gacgtccgttccatccatttcctaccgttccccgaggtcaaggaggagtacttcgacgag
gttatcgagcgcagagtgaagcgcatgcaaaccgtcattgagctcacccgcgccgtccgc
gagcggcacaacctctcgctaaagacgccgctccaggagctcctcgtcttccacgcagac
ccgcagtacctcgaggacgtcaaggagctcgagcgctacgtccagtcagagctcaacgtc
cgcgacatcgtcttcacctcggacgaggccgcagcgggggtcaagtaccgcgcagtcgcg
gactgggccgtgctagggcgcaagctccgcaaggacctcggccgcgtcaaaaacgcgctt
ccgaacgtgccgagcgatggcgtgcgcaagtacgtcgagacgggcaagctcactgtagac
ggcatcgagcttgttgcgggcgacctcgccgtgcagcgatacatcgagctgcctgagcag
gcgcaaggcggcgacgcgacgcacgcgacgaacacggacaatgaggtcgtcgtcaggctc
gacgtcactgtgcaccccgagctgcagacggagtacctcgcgcgggagttcatcaaccgt
gtgcagaagctccggaagcgtgcgggtctgcaggcgacggacgacgtcgatgtgtactac
gcgttcgaggaaggtgccggggacgacctccgcgcggccgtcgaggcgtacgctgagacg
atccagaagactacgaggagcgtgccgaggagtgtgtcggaacgtgggacagacaggaag
gtacttacggaggaggagcaagagatcgcagatgtgaaattcacgctttctttggcgtgg
cgatag
DBGET
integrated database retrieval system
