Escherichia coli clone D i2: i02_0908
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Entry
i02_0908 CDS
T02004
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eld03009
]
i02_0908 (rumB)
Enzymes [BR:
eld01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
i02_0908 (rumB)
Ribosome biogenesis [BR:
eld03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
i02_0908 (rumB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AER83494
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Position
919516..920643
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AA seq
375 aa
AA seq
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MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVQQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgctgattttccg
gttgaggaatggtgtgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgagatggtaca
ccggaagacctttgtgactgcccgctttatccagcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgtgcggggttaacgccctacaacgtggcgcgtaaacgtggt
gaactgaaatacattctgctgactgaaagccagagcgatggcggcatgatgctgcgtttt
gtactgcgttctgataccaaactggcgcaactgcgtaaggcgctgccgtggttacaggaa
caattaccgcagctgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcactggcagagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgccaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgcggtgtgggtggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcaccagaggccattgcctgtgcgaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactctacgcagtttgccaccgctcagggggaagtg
ccggagctggtgctggttaacccgccgcgccgcggcatcggtaaaccgctgtgtgattat
ctctcaacgatggcaccgcgttttattatctactccagctgtaacgcccaaactatggcg
aaagatatccgcgaactgcctggttatcgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacgctgctggtgcagcaataa
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