Escherichia coli O7 K1 CE10: CE10_3200
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Entry
CE10_3200 CDS
T01999
Symbol
ygcF
Name
(GenBank) conserved protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
eoc
Escherichia coli O7:K1 CE10
Pathway
eoc00790
Folate biosynthesis
eoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
CE10_3200 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoc03016
]
CE10_3200 (ygcF)
Enzymes [BR:
eoc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
CE10_3200 (ygcF)
Transfer RNA biogenesis [BR:
eoc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CE10_3200 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF5701
Motif
Other DBs
NCBI-ProteinID:
AEQ13936
LinkDB
All DBs
Position
complement(3255548..3256219)
Genome browser
AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gtccccgccatttttattcgtttacagggatgcccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggctgcgagcagtgaagatttgctggctgtcattggt
cgccagggatacaccgcacggcatgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgatctgctcgaaaagaacggttttagctgccagatcgaaaccagt
ggtactcatgaggtacgctgcacaccgaatacctgggttaccgtatcaccaaagctgaac
atgcgcggcggctatgaagtgttgtcacaggcactggagcgagccaacgaaatcaagcat
ccagtggggcgcgtacgtgatattgaagcactggatgaactactggcaacgctgaccgat
gataaaccgcgagtcattgcactgcagccgattagccaaaaggaagatgctacgcgttta
tgtatcgatacctgcatagcgcgcaactggcgtttgtcgatgcagacacataaatatttg
aatattgcctga
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