Eremothecium cymbalariae: Ecym_1209
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Entry
Ecym_1209 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_1209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_1209
03041 Spliceosome [BR:
erc03041
]
Ecym_1209
03032 DNA replication proteins [BR:
erc03032
]
Ecym_1209
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
Ecym_1209
Spliceosome [BR:
erc03041
]
Complex A
U1 snRNP components
Sm proteins
Ecym_1209
U2 snRNP components
Ecym_1209
Complex B
U1 snRNP components
Ecym_1209
U4/U6.U5 tri-snRNP components
Ecym_1209
Complex C
U2 snRNP components
Ecym_1209
DNA replication proteins [BR:
erc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
Ecym_1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF3138
Motif
Other DBs
NCBI-GeneID:
11469624
NCBI-ProteinID:
XP_003644273
UniProt:
G8JMZ2
LinkDB
All DBs
Position
1:422759..423244
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AA seq
161 aa
AA seq
DB search
MNKPTVSDKSTLKDLINYRLRVLAQDGRVYIGLLLAFDAHMNLVLADCIEERLPEQQLKT
LQHDPKHLPKPQKRTLGLAILRGEHVLSTLVESPPTLTKRERAHAQTKHKKKQVSKKQRA
TKASVGRVASSSLAADAAAAAAAAARPRPGRFQAPPGFRRR
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacctaccgtgtcagacaaatcgacactcaaagacctcatcaactacagacta
cgtgtcctggcccaggacggccgcgtgtacatcggcctcctgctggccttcgacgcccac
atgaacctggtcctcgcagactgcatagaagaacggttacccgaacaacagctcaaaacc
ctgcaacacgaccccaaacacctccccaagccccagaaacgcaccctgggactggccatc
ctgaggggcgagcacgtgctctcgaccctcgtcgagagccccccgaccctgaccaaacgg
gaacgcgcgcacgcccagaccaagcacaagaagaaacaggtgtccaagaaacagcgtgcc
accaaggcatctgtgggccgggtggcgtcatcgtcgctagcagccgacgccgccgccgcc
gcagcggcggcggcgcgtccgcggcccgggcggttccaggcaccgcccggctttaggagg
cgctag
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