KEGG   Eremothecium cymbalariae: Ecym_1209
Entry
Ecym_1209         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
erc  Eremothecium cymbalariae
Pathway
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_1209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_1209
   03041 Spliceosome [BR:erc03041]
    Ecym_1209
   03032 DNA replication proteins [BR:erc03032]
    Ecym_1209
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     Ecym_1209
Spliceosome [BR:erc03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Ecym_1209
  U2 snRNP components
    Ecym_1209
 Complex B
  U1 snRNP components
    Ecym_1209
  U4/U6.U5 tri-snRNP components
    Ecym_1209
 Complex C
  U2 snRNP components
    Ecym_1209
DNA replication proteins [BR:erc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Ecym_1209
SSDB
Motif
Pfam: LSM DUF3138
Other DBs
NCBI-GeneID: 11469624
NCBI-ProteinID: XP_003644273
UniProt: G8JMZ2
LinkDB
Position
1:422759..423244
AA seq 161 aa
MNKPTVSDKSTLKDLINYRLRVLAQDGRVYIGLLLAFDAHMNLVLADCIEERLPEQQLKT
LQHDPKHLPKPQKRTLGLAILRGEHVLSTLVESPPTLTKRERAHAQTKHKKKQVSKKQRA
TKASVGRVASSSLAADAAAAAAAAARPRPGRFQAPPGFRRR
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaacaaacctaccgtgtcagacaaatcgacactcaaagacctcatcaactacagacta
cgtgtcctggcccaggacggccgcgtgtacatcggcctcctgctggccttcgacgcccac
atgaacctggtcctcgcagactgcatagaagaacggttacccgaacaacagctcaaaacc
ctgcaacacgaccccaaacacctccccaagccccagaaacgcaccctgggactggccatc
ctgaggggcgagcacgtgctctcgaccctcgtcgagagccccccgaccctgaccaaacgg
gaacgcgcgcacgcccagaccaagcacaagaagaaacaggtgtccaagaaacagcgtgcc
accaaggcatctgtgggccgggtggcgtcatcgtcgctagcagccgacgccgccgccgcc
gcagcggcggcggcgcgtccgcggcccgggcggttccaggcaccgcccggctttaggagg
cgctag

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