KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10003513mg
Entry
EUTSA_v10003513mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K23113  structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10003513mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10003513mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    EUTSA_v10003513mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     EUTSA_v10003513mg
SSDB
Motif
Pfam: HATPase_c_3
Other DBs
NCBI-GeneID: 18011659
NCBI-ProteinID: XP_006394681
UniProt: V4KPT0
LinkDB
Position
Unknown
AA seq 1583 aa
MSSKRSLKRVLDLGDDDEEKDKFYKLKVLLPNSTNVTLELTNTESEMSMKNFVNQVKEVS
EKTRKNCVLSGKKRKQVDWERAAKSFLEFNGEKIKGTVRFEMFKPDWCNILRLDDGSGSG
EASIMYENMWDLTPDTDLLKELPQNYSFDTALADLIDNSLQAVWSCSTGERRLISVDVLA
DRISVFDSGPGMDSSEENSIAKWGKIGASIHRSHKSKAIGGKPPYLMPFFGMFGYGGAYA
CMHLGRRTLVSSKTKQSKKVFTLQLNKENLIGNRSNSGKNWKVDGGMRDPLDDEITLSPH
GSFTKVEIFEPKGRIPEIDQLRCKLKDIYFPYIQCDEISKTGKTLTPVEFRVNGKDLAGV
IGGEVATTNLNSSKGDEFWFQIRFVDKRKGSTSQEANARLKFLYFPIINGKESINTILET
LEKDGNKVSQSFETFGRVSVRRLGRLLPEVPWKSIPFMERGARASTLQKCCQRVKCFVDL
DAGFSPSPSKTDLASQNLFTLVLKNFGSKLKEKDTDVSIVIHKGGKCMNYVQLEQSFQAW
VLDMHKSYDEEHASGEDDAIVICDSLDNKALGISLDCKAVRVHNVMKRKGMSWERGQKIK
ILKGACTGAHKNDVYATIDYFLIENFEDETGGDARIICRQINFSESEGCELSIIKGISRL
EIRKSSSFPISIIDSGNCVHLDETEWNKKLERQKEKDPSRIDLLDDRDCSALNLNGESTL
ADTMCAGQTPPQQIVAVVRPGCFTSSKMSKKLDQKQIVKMDGEMVVEVEYIQDCNMKSKE
KNAEPLYTDCSFPTSRGGFHGLYIFPLESKFPTMFKKAGTYNFSFSVGNSITCKKKVVVK
SSSKVGSWKLASNQETINVRVGSSLPPCSIACLDEYENHIPFTCVPSLEVKLKASQGFEV
PIEKIDASLIDRGILKVKNMLVETDGLDQIRPDYKATLEICSKDEPFSVSVACKVNPGPL
KRVVENNSQALENLLPGSTVEDYILQMLDGYNNHVAEGTNVKICIDGYSIQDSNSMGLNR
KVDSHGCIDLSGILKVTAGYGKSVSLAVMSGKKEIFKKESLIEKRELVLLTKLPEYCTAG
SNLTNLIFKVTESDGSLDTSIHDDEKSGCSHTMSIESESSSVESGVRYAFLHGTCKIPSL
SLPETEGAFSFKVFHSRYPELHMILKIQLTSPQTFEIDEAGCSTPYPRICLTPQSKMGST
TNPLVTPTQETPSSQCRVLAMRTVSSLALSSQTSPMDMEQYTGMLKANLSSYIERRAETY
ERLKCLEVEKEHAEQELRTLQASLEHLSAAFPECLSTKEIIMKKIEEMHQDTAASVFCSL
YRNAPSPRSLFLSKKGVFGLVVTLATVDSTSLSRVLSEYLGEDTMLALVCRSSRFVPNSA
EYLRLQTEAARLGRSISNRFLVLCLDAIRPWIDGLVENDPQRKLAMDDPKLPDGEPIPGF
KGYAVNLIDLAPEDLHIKTYAGHGLRETLYYGLFGNLQVYETQAHVVEALPHIHGGGAVS
LDGFIAKGNGFLYSGCSKTEIHFPITVTENEGEKLRQLEAAKDRLRMVEEKILEDRFSLC
KLEKKLKETNETFDNTTKISFED
NT seq 4752 nt   +upstreamnt  +downstreamnt
atgagtagcaagagatcgctcaagagagtattggatctaggcgatgatgatgaagaaaaa
gataagttttacaagctcaaggttctgttaccaaacagcacaaatgtgacactcgaactc
actaacacagaatccgaaatgtcaatgaagaatttcgttaaccaggtgaaagaagtgtct
gaaaaaactaggaaaaattgtgtcttgtctggtaagaagaggaaacaggttgattgggag
agggctgctaagtcttttctcgagtttaacggtgaaaagattaaaggaaccgttcgattt
gagatgtttaagcctgactggtgtaatatactacgtcttgatgatgggtctggttctgga
gaagcttccattatgtatgagaatatgtgggacttaacacccgacactgatctgcttaaa
gaactacctcaaaattatagcttcgacacagctcttgcggatcttattgataattcattg
caagctgtgtggtcttgctccacgggagaacgaagactgattagcgtggatgttctcgca
gatcgtatttcagtctttgattctggtcctggaatggacagtagcgaggaaaactctatt
gctaaatgggggaaaataggggcgtccatacatagatctcataaatccaaagctattgga
gggaaacctccatatcttatgcctttctttgggatgtttggatatggaggtgcttatgct
tgtatgcatttgggaaggcgtactttggtgtcttcaaagactaaacagtcaaagaaagta
ttcaccttgcaactcaataaagaaaatttgattggcaatcgttctaactcaggaaaaaac
tggaaggtggatggtggaatgagggatcctttagatgacgaaattacgttatctcctcat
ggaagcttcacaaaggttgagatatttgaacccaaaggtagaatcccagaaatagatcaa
cttcggtgcaaacttaaggatatttattttccttacatccagtgtgatgaaatctccaaa
acggggaagactttaacgcctgtagagtttcgggtcaatggaaaagatttagctggggta
attggtggagaggttgccaccaccaacctaaactcctccaagggtgatgaattttggttt
cagattcgatttgttgacaaaagaaaagggagtacatcacaagaggcaaacgctcgactc
aagtttctttattttccaatcatcaacggtaaggagagcattaatacaattttggaaacc
ttagagaaggatgggaacaaagtttctcaaagctttgaaacgtttggtcgtgtttctgta
cgaaggctcggtcgtttactcccagaagtcccttggaaatcaattccgtttatggaaaga
ggagccagagcctcgaccttacagaaatgttgccaaagggtgaaatgctttgttgatttg
gatgcggggtttagcccatcgccttcaaaaactgaccttgcaagccaaaacctattcact
ctggttctgaaaaattttggtagtaaattgaaagagaaggatacagatgtcagtatcgtg
attcataaaggaggaaaatgcatgaattacgtgcaactggaacagagttttcaggcttgg
gttcttgatatgcataagtcttatgatgaagaacatgcatcaggtgaagatgacgcaatt
gttatatgtgattctttggataacaaagctcttggcatttcgcttgattgtaaagctgtg
agggtgcacaatgtaatgaagagaaaagggatgtcatgggaacgtggacagaagatcaag
attctcaaaggagcatgtacaggagctcacaagaacgatgtctatgcgactattgactat
ttccttatagaaaatttcgaggacgaaactggcggtgatgcccggattatatgcaggcaa
atcaatttctctgagtctgagggatgcgagctttcaatcattaaaggaatttcaagactg
gaaattagaaagtcttcatctttcccaatcagtattatagactctggaaattgtgtacat
ctggatgaaaccgaatggaataaaaaactcgaaaggcaaaaggaaaaagatccatccaga
atcgatttgctagacgacagagattgctctgcattgaaccttaatggggagtcaacactt
gctgatacaatgtgtgccggacaaactcctccgcaacagattgttgcagttgttagacct
ggttgcttcacatcttcaaagatgtcgaaaaagttggatcagaagcaaattgtgaagatg
gatggagagatggtcgtggaagtggaatatatacaagactgcaatatgaaatcaaaggaa
aagaatgcagaacctttgtatacggattgttcttttcctacatcacgtggagggtttcat
ggtctttacatatttccacttgagtccaagttcccaaccatgttcaagaaagctgggact
tacaatttttcattctctgttggaaattcaattacttgtaagaaaaaggtggttgtcaaa
tcatcttcgaaggtgggaagttggaaacttgctagtaaccaggagaccattaatgtccgt
gtgggatcgtctcttcctccttgctctatcgcttgcttggatgagtatgagaatcatata
ccattcacttgtgttccaagtctggaagttaaactaaaagccagccagggattcgaagtc
cccattgaaaagattgacgccagcctgattgaccgtggaattctcaaagtcaagaatatg
ctcgtggagactgatggtttagatcagatcagaccagattataaagcaaccttagagata
tgctcaaaggacgaaccattttctgtctcggttgcttgtaaagttaatcctgggcctctg
aagcgtgttgtcgagaataattcacaggctttggaaaatttgcttccaggttctactgtt
gaagattatatcttgcagatgttagatggatataataaccatgttgcagaaggtaccaat
gttaagatttgtattgatggctattctatccaagactcgaactcgatgggcttaaaccga
aaggttgatagtcatggctgcattgatctgtctggaattctcaaagtcacagcaggctat
ggaaaatctgtttcactcgctgttatgtctggcaaaaaagagatcttcaagaaagagtct
cttattgagaaaagagagctcgtgctcttaacaaagctgcccgagtactgtactgctggt
tcaaatcttacaaacctcattttcaaagttacggaatcagatggttctttggatacaagt
attcatgatgacgaaaaatccggatgttcccacacaatgagcattgaatccgagtcaagc
agcgttgagagtggagtcagatatgcctttctccatggtacctgcaaaattccttctctc
tctctgcctgagacagagggtgccttctccttcaaggttttccattctaggtatcccgag
cttcatatgatcttaaagattcagttaacttctcctcaaacatttgaaattgatgaagct
gggtgttcaacaccttatccaaggatttgccttacacctcaatcaaagatgggttcaacc
acaaatccattggtgactccaactcaagagactccaagctcacagtgtagagttttggcc
atgaggacagtgtcatcattggctctcagtagccaaactagcccaatggatatggaacag
tacactgggatgctaaaagcaaatctcagtagttacatcgaacgcagagcggaaacatat
gagcgtctaaaatgtttggaagttgaaaaagaacatgctgagcaagagttgcgtaccttg
caagcttctctggaacatctcagtgctgcgttcccagaatgcttatcgaccaaagaaata
atcatgaaaaagatcgaagagatgcatcaagacactgctgcatcggttttctgttctttg
taccgaaatgctccgtctccgaggtctctgtttttgtcgaagaaaggagtgtttggcctg
gtcgtgacgcttgctacagttgactccacttcccttagcagggtattgtctgagtatttg
ggagaagacacaatgctagctttggtatgcagatcgtcacgatttgtacctaatagtgct
gagtatctcaggcttcaaactgaagcagctaggctcggaagatcgataagcaatcggttt
cttgttctatgtcttgatgcaatcagaccttggattgatggacttgtggagaacgatcct
cagaggaaattagccatggatgatccaaagctgcccgatggggaacctataccgggtttc
aaaggctatgcagtgaatttgattgatctagctcctgaggacttgcacataaaaacatat
gcgggtcacgggcttagagagactctgtattatggtctctttgggaatttacaagtttac
gagacccaagcacatgttgtagaagctcttccacacattcatggtggtggtgcagtatct
ttagatggttttatcgcaaaaggaaacggatttctttattctgggtgcagcaaaacggaa
attcatttcccgataacagtaacggaaaatgaaggagagaagctgagacaactagaagca
gcaaaagacagactgagaatggtggaagagaagatactggaggacaggttttctttgtgt
aagttagagaagaaattgaaggagactaatgaaacatttgacaatacaacaaaaatttct
tttgaggactaa

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