Fragilariopsis cylindrus: FRACYDRAFT_187271
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Entry
FRACYDRAFT_187271 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_187271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_187271
Enzymes [BR:
fcy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
FRACYDRAFT_187271
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
FRACYDRAFT_187271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
Ribosomal_L40e
C1_2
Prok-RING_4
DUF4599
Motif
Other DBs
NCBI-ProteinID:
OEU15175
JGI:
187271
UniProt:
A0A1E7FAX6
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MSSGGSVDLYGYGDGSPDGYQEELDNNNSDDENENGNGATCCIPVSNENTKRAELTRPPC
NHYDRNCTLIAPCCGASFGCRICHDDSPILPPLLIAKRASRRSTRSSSMPGGFTSMEDST
HRDTHHTIDRFLVSDIICRECYTKQSSKTNNCVNCDIQFGEYHCSICNLWMANDENPYHC
PDCGFCRVGGAENFQHCHDCGMCIDKTLYSNHNCKSGKYKSNCPVCQEFLFSSRSASHEM
PCGHAIHWECFRQLATHDSRCPVCKKTAETKDRMMPTWNAMAQGITFQPVPPELARVVNV
SCIDCETSEDARAWHFIGVQCRTCSSFNTVVDRIIMSGEEANEFLEALQNRNDLANNEEG
SERISRRRISRRRSHF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtggagggagtgttgatctatatgggtatggtgatgggagtccggacggatat
caagaggaattggacaataataacagcgatgacgaaaacgagaacggcaatggcgccaca
tgttgcattcctgtttccaatgagaatacgaagcgtgcagaactcacgcggcctccctgc
aaccattatgatagaaattgtaccttgattgcaccctgttgcggagcctcgtttggatgc
cgtatttgtcacgatgatagtcctattctaccacctttacttattgcgaaaagagcctct
cgacgttccacaagaagctcttctatgccgggtggattcactagcatggaggatagtacc
caccgtgatacacatcataccatcgatcgtttccttgtttctgacattatctgtcgcgaa
tgttataccaaacagagttcaaaaacaaataattgtgtcaattgcgacattcagttcggg
gaatatcactgcagtatctgcaacttatggatggcgaatgacgaaaatccgtaccattgt
ccggactgtggtttctgccgagttggtggtgcggaaaacttccaacattgtcacgattgt
ggtatgtgtatagacaaaaccctttattccaatcacaactgcaagagtgggaaatacaag
tcgaactgcccggtttgtcaagagttccttttcagctctcggagcgcttctcatgagatg
ccatgtggtcatgcgatacactgggaatgcttccgacagttagcgactcatgactcacgt
tgccccgtttgcaagaaaacagcagaaacaaaggataggatgatgcctacgtggaatgca
atggcacagggaattactttccaacctgtccctcctgaactagcccgagttgttaatgta
agctgtatcgactgcgaaacatctgaggacgctcgggcctggcattttattggggtccaa
tgccgcacttgctcatcgtttaatactgtggtggacaggattattatgtccggtgaggaa
gcaaatgaattcttggaagcccttcagaatagaaatgacttggcaaataacgaggaagga
agtgaacgaatcagtcggcgaagaattagcagaagacggtctcatttctga
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integrated database retrieval system