Candidatus Formimonas warabiya: DCMF_25705
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Entry
DCMF_25705 CDS
T07208
Name
(GenBank) glycyl radical enzyme
KO
K23121
trans-4-hydroxy-L-proline dehydratase [EC:
4.2.1.172
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00330
Arginine and proline metabolism
fwa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DCMF_25705
Enzymes [BR:
fwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.172 trans-4-hydroxy-L-proline dehydratase
DCMF_25705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
DUF2529
Ndr
Motif
Other DBs
NCBI-ProteinID:
ATW28904
UniProt:
A0A3G1L2N2
LinkDB
All DBs
Position
complement(5689166..5691526)
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AA seq
786 aa
AA seq
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MNERIQKLREQSVSTVPTISIERAVLMTEAYQKYQGKVSIPVLRALSFKHLCENKTVVIL
DGELIVGERGPKPQSAPTYPELCCHSVEDFEIMDQRDKIFFKVSDEAKKIQEETIIPFWK
GKAVRDLIMDQMTPEWHDCYEAGIFTEFMEQRSPGHTVCDDKIYYKGMLDFKAEIKKHLD
SLDFVNDFEAYDKQEELKAMDIACDALIIFARRYAEKAQEMAAECQDEKRKAELIQIAEN
CAWVPAHAPRTFHEALQMYWFVHLGVITELNTWDAYCPGHLDQHLNPFYQKEIAAGTLTR
ESAMELLESFWVKFNNQPAPPKVGITLKESATYTDFCNINIGGMKADGTDGVCDVSYLLL
DVIKDMRILQPSTNVQISKRNPDKFVIEACRVIREGMGFPSVFNHDAVVQELLRQGKSLE
DARKGGTSGCVEVGAFGKEAYILTGYFNMVKVLEITLHNGVDPQTGKKIGLETGDSRNFR
SMDDLMEAFKKQIAYFIDVDIRGNNVIEKLYAKYMPSPFMSVITEDCITKGKDYNAGGAR
YNSRYIQFVGLGSITDCFSSIKKHIFDDQTLTMDKMLAVLNANFAGFEKERQIFLNKTPK
YGNDDDRADSLIMGMFEIIYDLVNGRPTPNGGQYRVEMLPTTCHVYFGSVIGATPDGRKA
GVALSEGISPVQGADKCGPTAVIKSAAKLDQLRTGGALLNQKFTPSVLEGETGLACLKDL
IRSYFRMDGHHIQFNVVDSNMLRDAQHHPENYHDLIVRVAGYSDYFNNLTTELQDEIILR
TEQQGF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagcggattcagaaattacgtgagcagagcgtcagcaccgtgcctaccatctcc
atcgaacgggccgttctgatgacggaagcgtatcagaaatatcagggcaaggtttccatc
ccggtgctgcgggccctgtctttcaaacatctttgcgaaaacaagaccgtagtcattctg
gacggagaactgatcgtgggcgaacgcggccccaaaccccagtccgcgcccacgtatccc
gaactgtgctgccacagtgtggaagactttgagatcatggaccaacgggataaaatcttt
ttcaaggtcagcgacgaggccaaaaagattcaggaagagaccatcatccccttctggaaa
ggcaaggccgtccgggacctgatcatggatcagatgaccccggaatggcatgactgctat
gaagccggtatcttcaccgaattcatggaacaacgttctcctggccacaccgtctgcgac
gacaaaatctattataaaggcatgctggatttcaaagccgaaatcaagaaacacctggat
agtctcgactttgtcaacgacttcgaagcctatgacaagcaggaagagctgaaggccatg
gacattgcctgcgacgccctgatcatcttcgcccggcgctatgcggagaaggcccaggaa
atggctgcagaatgccaggatgaaaagcggaaagccgagctgatccagatcgcggagaac
tgcgcatgggtccccgcccacgcgccccgcacctttcatgaagcattgcagatgtactgg
ttcgtccatctgggcgtcatcaccgagctgaacacctgggatgcatactgccccggccat
ctggaccagcatctcaatcctttctatcagaaagagattgccgccggcaccctcacccgg
gaaagcgccatggagctgctggaaagcttctgggtaaaattcaacaaccagcccgcgccg
cctaaggtgggcattaccctaaaggaaagcgccacatacaccgatttttgcaatatcaac
atcggcggtatgaaggccgacggtaccgacggcgtctgcgacgtctcctacctcctgctg
gatgtgatcaaggatatgcgcattttgcagccgtccaccaacgtgcagatcagcaaaagg
aatccggacaaattcgtcatcgaagcttgccgggtgatccgggaaggcatgggcttcccc
tccgtgttcaaccacgacgccgtggtgcaggaactgctccgccagggcaagagcctggaa
gacgcccgcaaaggcggcacctccgggtgcgtggaagtgggcgccttcggcaaggaagct
tacattctcaccggttacttcaacatggtcaaggtgctggagattaccctgcacaacggc
gttgatccccagaccggcaaaaagatcggactggaaaccggcgattcccggaacttccga
agcatggacgatctcatggaagcctttaaaaaacagatcgcctacttcatcgacgtagac
atccggggcaacaacgtgatcgaaaagctctatgccaaatatatgccctctcccttcatg
agcgtgatcaccgaagactgcatcaccaagggcaaagactacaatgcgggcggtgcgcgc
tacaacagccgctacatccagtttgtgggcctgggctccatcaccgactgcttcagctcc
atcaaaaagcatattttcgacgatcagaccctgaccatggataagatgctggccgtgctg
aacgccaacttcgcaggcttcgagaaggaacgccagatcttcctgaacaagacgcctaaa
tacggcaatgacgacgaccgggcggacagcttaatcatgggcatgttcgaaattatctat
gacctggtcaacggcagacccacccccaacggcggtcagtaccgggtagaaatgctgccc
accacctgccacgtctacttcggctccgtcatcggtgccaccccggacggccggaaagcg
ggcgtggccctctccgaaggcatctctcccgtgcagggggcggacaaatgcggtcctacc
gcggtaatcaaatccgcggccaagctggaccagctccgcacgggcggcgcactgctgaac
cagaagtttaccccctccgtgctggaaggggagaccggtctggcctgcctgaaagacctg
atccgttcttacttccgcatggacggccaccacatccagttcaacgtggtggacagcaat
atgctccgggacgcccagcatcatccggaaaattatcatgacctcatcgtccgcgtggcc
gggtacagcgattacttcaataatctgaccaccgagctgcaggacgagatcattctccgt
accgagcagcaggggttctaa
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