Gymnogyps californianus (California condor): 127023096
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Entry
127023096 CDS
T08687
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127023096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gcl03000
]
127023096
04121 Ubiquitin system [BR:
gcl04121
]
127023096
03036 Chromosome and associated proteins [BR:
gcl03036
]
127023096
Enzymes [BR:
gcl01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
127023096
Transcription factors [BR:
gcl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
127023096
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
127023096
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
127023096
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
127023096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
Motif
Other DBs
NCBI-GeneID:
127023096
NCBI-ProteinID:
XP_050762981
LinkDB
All DBs
Position
16:complement(13613531..13733277)
Genome browser
AA seq
1299 aa
AA seq
DB search
MKLSKKMEAEKDSGRRLRSIGRRRYDENEDLSDVEEIVSIRSFNLEEKLKSKMYHGDFVH
AMDGKDFTFEYVQREALRVPLIFRNKDGLGIKMPDPDFTVRDVKLLVGSRRIVDVMDVNT
QKGVEMSMSQFVRYYETPEAQREKLYNVISLEFSHTKLENIVKRPNVVDLVDWVDNMWPQ
HLKERQTDATNAISEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIP
PTLQNLELYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVF
GGNILHSFNVPMQLRIYEIEDRTRVHAKFRYPFYYEMCWYVLERYVSCVTQRCHLSKEYQ
KESMLIDAKRKRSTDSYSSDSWLDMDEESCDAHIQEEKDDSLDKNSKSLVDGSSSPNSTH
SEGKEGVGRKQKATVMRYLKRTLSNESDDSVKSTTPTDYPKTPTGSPATEVSTKWTHLTE
FELKGLKALVEKLESLPENKKCVPEGIEDPQALLEDMKNILKEHADDDQNLAISGVPVVS
WPKKTTKNRAVGRPKGKLGTASAVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCK
DMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEESKFNLMLMECSIC
NEIIHPGCLKVKESDGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQ
KMNRDNKEVTDAAKRKEDCEETPRRKSEEHSKKTQVDSILRRKSDEVHLWRKRKFEKPQE
PTMRKRLKLGKEDKLFRKKRRSWKAPDDRTAMIKPLRRLKQEPEDDLPEAPPRSKDSDQS
RSSSPTAGPSTEGAEPRDKKKFKMRRKRRLPNKELSKELSKELNQEIQKTENSLANENHQ
PIKSEPESENEEPKRALNNSERLHRFSKGLNGTPRELRHQLIPSLRSTPRGITRPPPSLS
PPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMQREVWMAVFSYLSHRDLCICMRVCKT
WNRWCCDKRLWTKIDLNHCKSITPLMLSGIIRRQPVTLDLSWTNISKKQLSWLINRLPGL
RDLLLSGCSWIAVSALCSSSCPLLRTLDVQWAEGLKDAQMRDLLSPPTDNRPGCNGCTLE
SMETLSSSSGKEQFCGSCHIRPDISSGQIDNRSKLRNIVELRLAGLDITDASLRLIIRHM
PLLSKLNLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSYFKRCGNICQ
IDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccaaaaaaatggaggcagagaaagactctggaagaagattgcgatctatt
ggcagaaggcgatacgatgagaacgaggacctctcggacgtggaggaaattgtcagcatc
aggagtttcaatttggaagagaaattaaagagtaaaatgtatcacggggatttcgtgcat
gccatggacgggaaagattttacttttgagtatgtgcaaagagaagctctcagagttccc
cttatcttcagaaataaggatggactgggaattaaaatgcctgacccggatttcaccgtc
agagatgtgaagctattagtgggaagccgacggatagtggacgtgatggatgtgaacaca
cagaaaggtgttgaaatgagcatgtctcaatttgtgagatactatgaaacaccagaggcc
cagcgtgaaaaactctacaatgtcatcagcctggagttcagtcacacgaagctggagaac
attgtcaagcgccccaatgtggtggacttagttgactgggtggataatatgtggccacag
catttgaaggagagacagacggatgctaccaatgctatttcagagatgaaataccccaaa
gtgaaaaagtactgtttgatgagtgtgaaaggatgcttcactgattttcatattgatttt
ggtggcacttcagtgtggtatcacgttttccgtggggggaagatcttctggctgattccg
cctactctgcagaatctagaactttatgaagaatgggttctctcaggaaagcaaagtgat
atctttctgggagacagggtggaacgatgccaaagaattgagctgaaacaaggctatacg
ttcttcattccttcagggtggatacatgcggtttatactccagtagattctctggtgttt
ggtggaaatatcctgcatagctttaatgttcccatgcagcttcgcatctatgaaattgag
gacagaacaagggtgcatgccaaattccgttatcctttctactatgaaatgtgctggtat
gttctggagagatacgtgtcctgtgtgacccagcgctgccacctcagcaaagagtaccag
aaagaatcaatgttaattgatgcaaaaagaaaacgcagcacagacagctattcatcagat
tcgtggttagacatggatgaagaatcttgtgatgcccatatccaggaggagaaggatgac
agcttggataagaactccaaatccttggtggatggctcctcctcacccaacagcacacac
tcagaagggaaggagggtgtaggaagaaaacaaaaagccacagtaatgagatacctaaaa
agaactttgtctaatgagtcagatgacagcgtaaaatcaacgacccccacggactatccc
aaaacaccaacggggtctccagctacagaagtttcaaccaaatggactcacctcacagaa
tttgaactgaagggtttaaaagccctggtggaaaagcttgaatctctcccagagaacaag
aagtgtgttccagaaggcatcgaagatcctcaggctctcctagaggacatgaagaacata
ctgaaggaacatgctgatgatgaccaaaatcttgccatttcgggtgtccctgtggtcagc
tggcccaagaagaccacaaagaacagggcagtcggacggcccaaagggaaactgggcact
gcttctgcggtgaagctcgcagctaatcggacaaccgctggagcacgtcggaggaggacg
cgatgccgcaagtgcgaggcttgtctgcggacagagtgcggcgagtgtcacttctgcaaa
gacatgaagaaatttgggggacctggcaggatgaaacagtcctgcattatgaggcagtgt
atcgcaccggtgttgcctcatactgctgtgtgtctggtgtgtggagaagctgggaaggag
gatactgtggaagaggaggagagcaagtttaatctcatgctaatggaatgctccatttgt
aatgaaatcatacacccaggatgccttaaggtgaaggaatcagatggtgtggttaacgac
gagctgccgaactgctgggagtgtccaaagtgcaaccatgcagggaaaactggaaaacaa
aagcgcggaccaggattcaaatacgcatcaaatctcccaggctcattgctgaaggaacag
aaaatgaacagagacaataaggaagtaacagatgctgcaaaacggaaagaggattgtgaa
gaaactcccaggcggaaatcagaggaacattccaaaaagactcaagttgactcaatactg
aggagaaagtcagacgaagtgcatctgtggaggaaaaggaaatttgagaaaccccaggaa
cccactatgagaaagcggctaaaacttggaaaagaagacaaactcttcaggaagaagcgg
cgatcgtggaaggctccagatgaccgaactgccatgatcaagcccctgcggcgcctcaag
caggagccagaggatgacctgccagaagcacctcccaggtccaaggatagtgaccagtca
cggtccagctcgcccactgcaggtcccagcacggagggcgccgagcccagggacaagaag
aagttcaagatgaggaggaaaaggcggcttcccaataaagaactgagcaaggagctcagc
aaggagcttaaccaggagatccaaaaaaccgagaacagccttgccaatgagaatcaccaa
cccatcaaatctgaacctgagagcgagaatgaggaacctaagcgtgctttgaacaacagc
gagagactccataggttcagcaaagggttaaacgggactccccgggagctgaggcaccag
ctcatccccagcctgcgaagcacacctcggggaataacccggccaccgccttcgctctct
cctcccaaatgcattcagatggaacggcacgttatccggccacctcccatcagcccccct
ccggactcgctccccctggatgacggggcagcccacgtgatgcagagggaagtctggatg
gctgtctttagctacctcagtcatagagacttgtgcatctgtatgagagtttgcaagacc
tggaacagatggtgctgtgacaaaagattatggaccaaaatagatttaaaccattgtaaa
tccatcactccacttatgcttagtggcattattaggagacagcctgtaacccttgatctt
agctggacaaatatatctaaaaagcagctgagttggcttatcaacagactgccaggtctt
cgagacttgctgttatcagggtgctcatggatagcagtgtcggcactttgtagttccagt
tgtcctttactccgaactctggacgtgcagtgggcagaaggactgaaagacgcacaaatg
agagacctcttgtcaccacccacagataaccggccaggctgcaacgggtgtactttagag
agtatggaaacactttcttccagttcagggaaggagcagttctgtgggtcatgccacatt
cgcccggatatcagctcaggtcagatcgacaaccggagtaaactacggaacatagttgag
ctgcgtttggctggcctggatattacagatgcttctttgcggctgatcataaggcacatg
cctctgctctccaaactcaatcttagttactgtaatcatgtgacggatcagtctattaac
ctgctgaccgcggttggaaccaccacgcgggattcattaacagaaattaatttatcagac
tgcaataaggttactgaccagtgcctgtcttacttcaaacgttgtggcaatatctgccag
atcgacctgaggtactgcaagcaagtgacaaaagaaggctgcgagcagttcatagcggaa
atgtcagtaagtgttcagtttgggcaagtggaagaaaaacttctgcaaaaactgagttag
DBGET
integrated database retrieval system
