Gemmata sp. SH-PL17: VT84_30235
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Entry
VT84_30235 CDS
T04358
Symbol
cbs
Name
(GenBank) Putative cystathionine beta-synthase
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00260
Glycine, serine and threonine metabolism
ges00270
Cysteine and methionine metabolism
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01230
Biosynthesis of amino acids
Module
ges_M00035
Methionine degradation
ges_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VT84_30235 (cbs)
00270 Cysteine and methionine metabolism
VT84_30235 (cbs)
Enzymes [BR:
ges01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
VT84_30235 (cbs)
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-ProteinID:
AMV28723
UniProt:
A0A142XNW9
LinkDB
All DBs
Position
complement(7117802..7119151)
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AA seq
449 aa
AA seq
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MLESVLDTVGRTPLVLLNRLTEGLQAKVAVKVEFANPGGSVKDRVAQAMIADAELRGALR
PGGTIIEATAGNTGVGLAMVAAVKGYRCIFVLPDKMSNEKILLLKAYGAEVVITPTAVAP
DSPESYNGVADRLAREIPGAWRPNQFTNAANPEVHYRTTGPEIWEQTKGKVTVFVCGVGT
GGTVSGVGKYLKEMNPNIKIVGADPEGSVLSGGTPKPWKVEGIGEDFVPKTFSSKYVDDW
VRVGDAESFFVARELARREGMLLGGSTGTNVAAALRYARRLGPGQLVVALGCDTGRNYLS
KFFDDRWLSENNLTFTEAPAHSVGDLLKKRGDRKLVMITPDATAEQAIQLLEATGISQLP
VMDAGKPVGSVQEVSLARILHDGKDPTKVTISDLMARPLPTLDVRTHLDEAYRLLLAGYT
GVLATNDGAVVDIVTRIDLIHYWGSNRAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaatccgttctcgataccgtcggccggacgcccctggtgctcctcaaccggctc
accgaggggttgcaggccaaggtcgcggtgaaagtggagttcgccaatcccggtgggagc
gtgaaggaccgcgtggcccaggcgatgatcgcggacgcggaactgcgcggcgcgctccgg
cccggcggcaccatcatcgaagccaccgcgggcaacacgggtgtggggctggcgatggtc
gcggcggtgaagggctaccgctgcattttcgtgctgccggacaagatgtcgaatgagaag
atcctgctgctgaaggcttacggggcggaagtcgtcatcacgccgacggccgtggcaccg
gactcccccgagagctataacggcgtggccgatcgactcgcgcgcgagatccccggagcg
tggcgccccaaccagttcacgaacgccgcaaacccggaagtccactaccgcacgaccggc
ccggaaatctgggagcaaaccaagggcaaggtaaccgtgttcgtgtgcggagtcggcacc
ggcggcaccgtgagcggggtcggcaagtacctgaaggagatgaacccgaacatcaagatc
gtcggcgccgacccggaaggctcggtgctctccggcgggacgccgaagccgtggaaggtc
gaagggatcggcgaggacttcgtccccaaaacgttttccagcaagtacgtggacgactgg
gtccgcgtgggcgacgcggagtcgttctttgtcgcgcgcgaactggcccggcgcgagggc
atgctcctcggtggcagcaccggtaccaacgtggccgccgcgcttcgctacgcccgccga
ctggggccgggccagctcgtcgtcgcgctcgggtgcgacaccgggcgcaactacctcagc
aagttcttcgacgaccggtggctgtccgagaacaacctcacgttcacggaggccccggcg
cactcggtcggcgacctgctcaagaaacgcggagatcgcaaactggtgatgattaccccg
gacgcgaccgcggaacaggcgattcagctcctggaggcgaccggcatctcacagttaccc
gtcatggacgcgggcaagccggtcggcagcgtccaggaggtgtcgttggcccgcattttg
cacgacggcaaagacccgacgaaggtgacgatcagcgatctgatggcgcgcccgctgccg
acgctcgacgtccgcacgcacctggacgaagcgtaccggctcctgctggcgggctacacc
ggcgtgctggccacgaacgacggcgcggtcgtggacatcgtcacccgcatcgacctgatc
cactactggggcagcaaccgcgcgaagtag
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