Gekko japonicus (Schlegel's Japanese gecko): 107119987
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Entry
107119987 CDS
T04299
Symbol
TDG
Name
(RefSeq) thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107119987 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gja03400
]
107119987 (TDG)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107119987 (TDG)
DNA repair and recombination proteins [BR:
gja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107119987 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
EspB
GAGA_bind
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
107119987
NCBI-ProteinID:
XP_015278111
LinkDB
All DBs
Position
Un
AA seq
398 aa
AA seq
DB search
MEADGPGRYYTPLQPAFYPFPFHEMMTASPNMELMDEEQALQEVLDPNCVQEPVQAATKG
RKRKNKSTEPKKPAAKAAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFN
LDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLSGLSDQQLNHMDDHTLPHKYGIGFTN
MVERTTPGSKDLSSKEFREGGRILVQKLQKYQPKIAVFNGKCIYDIFSKEVFGIKVKKLE
FGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIMSNTEVQEV
QYSFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYSEKTASESEPCNFPSNGTASSAEFS
SGSSFGDVPNGQWMTQSFTDQIPEFNNRRPQEEQENNA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgacggccccggaagatactacactcctcttcagccagcattttatcctttt
cctttccatgaaatgatgactgcatctccaaacatggagctgatggatgaagagcaagct
ctacaggaagttttggatccaaactgcgttcaggaacctgttcaagctgctacaaaagga
aggaagagaaaaaataaatctactgaacccaaaaagcctgctgctaaagctgccaaatca
aaaggcaagcaagagaaaatcacagacactttcaaagtcaaaaggaaagtggatcgtttt
aatggggtatctgaagctgaattgttgaccaaaacactgcctgacatactgactttcaat
ctggacattgtaattattggtataaatccaggcttaatggcagcctacaaagggcatcat
tatccaggacctggaaaccacttttggaagtgtctgtttctgtctggacttagtgaccaa
cagttgaaccatatggatgatcataccttaccgcataaatatggtattggatttacaaat
atggtggaaaggacaacaccaggtagcaaggacctttccagcaaagagtttcgggaagga
ggacgaattctggtgcagaaattacagaagtatcaacctaaaatagcagtttttaatgga
aaatgtatttatgatatttttagtaaagaggtttttggaataaaggttaaaaagctggaa
tttggactacagccacataaagtcccagacaccgaaacactttgctatgttatgccatca
tccagtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattattatataaag
ctgaaagacctaagggatcagctgaaaggcattatgtcaaacacagaggtccaggaagtg
cagtactcctttgacttgcagcttgcacaagaggatgctaagaaaatggccgtcaaagaa
gaaaaatatgatccaggttatgaagcagcttatggaggagcatacagtgagaaaacagcc
agtgagagtgaaccatgcaactttccttcaaatggaacagcatccagtgcagaatttagc
agtggatcttcctttggagatgtccccaatggacagtggatgacacaatcctttacagac
cagattcctgaatttaacaatcgtaggccacaagaggaacaagaaaacaatgcttaa
DBGET
integrated database retrieval system
