Hippocampus comes (tiger tail seahorse): 109511715
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Entry
109511715 CDS
T04969
Symbol
agrn
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq04512
ECM-receptor interaction
hcq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109511715 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109511715 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hcq00535
]
109511715 (agrn)
Proteoglycans [BR:
hcq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109511715 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
CFAI_KAZAL
Laminin_EGF
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
109511715
NCBI-ProteinID:
XP_019718526
LinkDB
All DBs
Position
Unknown
AA seq
2105 aa
AA seq
DB search
MSPQRRFGGGRPTLLLVGLLAVLLRCCVASCPEKDLEDREEEANVVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKTTINREILLDGGNKVMIGGFGNTGICDNQVATGDTRIFFLNPA
PESMGSEHKNELMLNSSLMRITLRNLEDVEHCVEAHKYIIADKPPHFTPAQPPDGCRGKL
CGFGAVCERDPNDPANAECVCKRGECPSLVAPVCGSDSSTYSNECELEKAQCQTQRRIKV
LRKGPCFLKDPCTEVTCSYGSTCVQSTDGLSAKCMCPLGCEGKPEQTVCGSDGKDYRNEC
ELHQYACKHHKNIRVQHQGRCDPCKDSENSFNTMCRVEAITRQPLFFGLPESCPPASEPL
CGSDGETYTSECAMRTTGLQKGIKLRKIHAGRCRGREECQEECRFNAVCLVEQLNTRCSC
DPIECDGSYKPVCGKDGHTYTNDCMRRKAECLGKILIPIKHVGPCDLHTPSPCLDKVCHH
GALCVVKNDEPVCECLEACPQTSDPVCGSDGSSYGSPCEMRAMGCALQKAIHIQHKGPCD
EACANCSFGAICDAQSAQCVCATECVESHQPVCGSDGTTYTSECELHVRACKKQMDLRVV
SQGECKTCGNTVCAWGARCVQSKCECPPCSGEAFSPVCGSDGTTYENECELRLSSCVQKK
RVEVAKAGSCDQDCGSGGSGSGAESCEQDRCRMFGGSLDEDAEEDRCVCDFTCHTVPHIE
VCGSDGKSYSNECELKKARCEKQEQLTVQHLGLCAATSLPEPAESQHCSLSVYGCCADNF
TAALGVGLAGCPSTCQCNVYGSYKGTCDPATGQCSCKPGVGGQKCDRCEPGFWNFRGIVT
ENMSGCTPCNCDASGSVRDDCEQMSGLCSCKAGVKGMKCNVCPDGSKMGMNGCDKGPEAP
NSCDELLCSFGASCFEVNGQAHCECPSPDCDERNKTKVCGSDGVTYGDQCQLRTIACRQD
KAIIVQHFGQCTETISERAERPTPTLLTATTITTPAPLNYNLVWAIPPPRTAETAETTVQ
PPATTPSPTLTHHRAQKNHHHPSIHIQPQSPRSTPAPTTTASQGSPAPSTAANSFEGSGS
GEPSGDDQAEEEEEPEEEAGSGVPPEASGAEEPFGPTLENTAITVADDKSSCDNTEFGCC
PDSLTPASSPDGTNCPPTMKFSGFLHLDQVEGQEIVYTPEMEDPKSELFGETARSIESAL
NDLFRKSEVRRDFMSIRVRNLAPSNSILAFVEANFKPDTRYTVEDIEGALLKQLKVSKGT
SIAVKKPLDENIRFNNYGVSSIPFYTTTTTFVTTHAPTTTTTFRRLVTSPYITRRPPGTT
RRPSTGRRTTTASAPVSTPIPMTTTAQPIITTTAMPRTTTVAHVRERLHKHQRPCDSHPC
LHGGTCEEEGDDFSCKCPAGRGGSVCEKVIKYFIPSFGGHSYLAFQTMSAYHTVRIAMQF
RASEMTGILLYNGQENKKDFISLAVVNGKVELRFNTGSGTGIVISNIEITQGRWHQLVVN
RNRRSAMLSVDNEPHVEGESPRGTDGLNLDTNLFIGGVPEEMKQDVKERTAVASGLVGCI
RLLDVNNRVLNLQENGVDNLYGSGVGECGNNPCLPNPCKNGATCQVKEAEMFHCQCSKGF
WGPTCADVHDPCEPSRCHPSSRCQALPEGGYKCECPMGREGRHCETVAERRGAYMPLFNG
DSYLELKGLHLYGHDLRQKVSMTVVLMANDSNGLIFYNGQKSDGKGDFISLSLDEGILEF
RYDLGKGPATIRSKEPIRLNMWNTISLERSNRKGEIMVNKKDAVRGEAPKSRKNLHVDLN
LKESLFVGGAPDYSRLARSAALTEGFKGTIQKIILMGTPILREENALRSQNLAMFQEHAC
SREPCHNGGRCNPQLDTYECVCLSGYSGGHCQNTIYEKSAGTETEAIAFDGRTFIEYHNA
VTRSQLTNEIPDPESVENPSDQSEKALLVNKFELRIRTEATQGLVLWSGKGVERSDYIAL
AIVDGRVQMMYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLA
ATQLDTDGALWLGGLEEVAVARRLPKAYSTGFVGCIKDVVVDGVELHLVEDALNSPQILH
CPAAK
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgcagcggagattcggaggcgggcggccaacgctgctcctagtcgggctgctg
gcggtcctgttgcggtgctgtgtggccagttgcccggagaaggacttggaggaccgcgaa
gaagaggccaacgtagttttgacgggcacagtggacgaaatcataaatatggacccggtg
cacaacacctactcttgcaaggtcagggtgtggcgctacttgaaaggaaagaccaccata
aaccgtgaaatcctcttggatggtggcaacaaggtgatgatcggtggcttcggcaacacg
ggaatctgcgacaatcaggttgccacgggtgatactcgcatattttttcttaaccctgcc
ccggagtcgatggggtccgaacacaagaatgaactgatgctcaactcaagcctgatgagg
attacgttgcggaacctggaggatgtggaacactgtgtggaagctcacaagtatatcatt
gcagacaagcctcctcactttacacctgctcagcctcctgatggctgccgagggaagttg
tgtggctttggcgccgtgtgtgagcgagacccgaacgaccctgccaacgcagagtgcgtc
tgcaagagaggcgaatgtccgtccttggtggcgcccgtgtgtggttccgattcgtccacc
tacagcaacgagtgcgagctggagaaagcccagtgccagacccagcgacgcatcaaggtg
ctgcgtaaggggccgtgctttctcaaagacccttgcactgaggtgacctgcagctacggc
agcacctgtgtccagtccactgacggcttgtcggctaaatgcatgtgcccgctgggctgt
gagggcaaaccagagcagacggtgtgtggcagcgatggaaaggactaccgcaacgagtgt
gagctgcatcagtatgcctgcaagcaccacaagaacatcagggtgcaacatcaaggtcga
tgcgacccttgtaaagacagtgagaacagtttcaacacaatgtgccgggtcgaggccatc
acccgccagccgctcttcttcggcttgcccgagtcgtgccccccagctagcgaaccgttg
tgcggcagtgacggcgaaacctacaccagcgagtgtgccatgagaacaacgggcctgcag
aaaggcatcaaactcaggaagattcatgcgggacgatgcagggggcgggaagaatgtcag
gaggagtgtcgtttcaacgccgtgtgtctcgtcgagcagctgaatactcgctgctcgtgc
gatcccatcgagtgcgacgggtcctacaagcccgtctgcggcaaggacggccacacgtac
accaacgactgcatgcgccgcaaggccgagtgcctgggcaagatcctcatccccatcaag
cacgttgggccctgtgatctccacacgccaagtccctgtttggataaggtgtgccaccac
ggcgcattgtgcgtggtcaaaaacgatgagcccgtgtgtgaatgtctggaagcctgccct
caaacatcagaccccgtgtgcggttctgacggcagcagttacggcagcccctgtgagatg
cgagcgatgggctgtgctctccaaaaagcgatccacatccagcataaagggccctgcgat
gaggcctgtgccaactgctctttcggggcaatctgcgacgcccaaagtgcacaatgtgtt
tgtgcgacagagtgtgtggagtcccaccagcccgtatgcggtagcgatggcacgacctac
accagcgagtgcgagctacatgtgcgggcctgcaaaaaacagatggacttgcgagtggtc
agccagggagagtgcaaaacttgtggcaacactgtgtgtgcctggggcgcccgctgcgtc
caaagtaaatgcgagtgcccaccgtgctccggtgaagcgttttccccggtgtgtggaagt
gacggcaccacctacgagaacgagtgtgaactccgcctgtcctcgtgcgtgcagaagaag
agagtcgaagtggcgaaggccggcagttgcgaccaagactgtggctcaggagggtcgggc
tccggtgcggagagctgcgaacaggaccgctgtcgcatgtttggaggctcgttggacgag
gacgccgaagaagaccgatgcgtgtgtgacttcacttgccacactgtgcctcacatcgag
gtttgtggctcagatgggaaaagttacagcaatgagtgcgagctgaagaaggccagatgt
gagaaacaagagcagttgacagttcagcacctgggcttgtgcgcagccacatcgctgccg
gagcccgccgagtcccagcactgctctctgtctgtgtacggatgctgtgccgacaacttc
acagccgccttgggagtcggactggctggttgtccgagcacctgccaatgtaatgtctac
ggctcctataagggtacatgtgacccagccactggtcagtgctcttgtaaaccgggtgtc
gggggacagaagtgcgaccgctgcgagcctggcttctggaacttccgtggtattgtgacg
gagaacatgagcggctgcacaccgtgcaactgcgacgccagcgggtccgtgcgtgacgac
tgcgagcagatgtcgggtctgtgctcttgtaaggccggggtgaagggcatgaagtgtaat
gtgtgtccagatggaagcaagatgggcatgaatggctgcgacaaaggtccagaggctccg
aattcatgtgatgagttactttgtagttttggagcatcttgttttgaggtgaatggtcag
gcccattgtgagtgcccctcacctgactgtgatgaacggaacaaaactaaggtgtgcggt
tctgatggggtgacgtatggcgaccagtgccagctgaggaccatcgcctgcaggcaggac
aaggccatcatagtgcaacactttggacaatgcacagaaaccatctccgagcgggctgag
cgacccactccaaccctgcttaccgccaccaccatcacaacgccagctcccttaaattat
aacctggtgtgggccattccgcctccgagaacggccgagactgctgagactacggtgcag
ccccctgccaccacgccctcacccacgctcacacaccaccgtgcgcaaaaaaaccaccac
cacccctccatccacatccaacctcagtcgccacggtcaacccccgcccccaccactacc
gcctctcaaggtagccccgccccctcgaccgctgcaaattctttcgagggttcgggcagt
ggggagcctagtggagatgaccaagctgaggaagaggaggagccggaagaggaagcgggt
agcggcgtgccaccagaggccagtggggcggaggagccttttggacccacattggaaaac
acggcaataaccgtcgctgatgacaagtcgtcctgtgacaacaccgaatttggatgctgc
cctgacagtctgactccagccagcagcccagatggaaccaactgtccacccaccatgaag
ttcagtggttttctgcacttggaccaggtggagggacaagaaatagtatacacccccgag
atggaggacccaaaatctgagcttttcggagagacggcccgcagcatcgagagtgccctc
aatgacctcttcaggaaatcggaggtacgcagagacttcatgagcattcgtgtccgtaac
ctggcacccagcaactccatcctggcctttgtggaggctaatttcaaaccagacacaaga
tacacagtggaggacatcgagggagctctccttaaacagctgaaagtctccaagggaacg
agcatcgcggtgaagaagccgctggatgaaaatattcgcttcaacaactatggcgtatcc
tccatccccttctatactaccaccaccacgttcgtcaccactcatgctcccaccaccacc
accaccttcagacgtttggtaacctccccctacatcacccgtcggcccccgggcacgacc
cgcaggcccagcactggcagacggaccaccaccgcatcagcacccgtcagcaccccgatc
ccaatgaccaccacagcacaaccgatcatcactacgacggcaatgccgcgaaccaccacc
gtcgcccacgtccgcgaaagactgcacaagcaccagagaccctgcgattcccacccttgc
ctccacgggggaacctgtgaggaggagggtgatgacttcagttgcaagtgccctgcaggg
agaggaggctctgtgtgtgaaaaagtgatcaagtactttatcccgtcattcggcggccac
tcttacttggccttccaaaccatgagcgcataccacaccgtccgcattgccatgcagttc
agagcatccgagatgacaggcatcctgctctacaacggccaagagaacaagaaggatttc
atctctctggctgtggtgaatggcaaagtggaactcagattcaacacaggttcaggcacg
ggcattgtgatcagcaacattgaaatcactcagggccgctggcatcaactggtggtgaac
cgcaatcggcgttccgccatgctcagtgtggacaacgagcctcacgtcgagggcgagagt
ccgcgtgggactgacggcctcaacctggacaccaatctgttcattggaggggtgcctgaa
gaaatgaaacaggacgtaaaggagaggactgctgtagcttcgggtctcgtgggctgcatc
cgcctgctggatgtcaacaaccgggtgctcaacctacaagagaacggtgttgataatctc
tatggcagcggtgtaggcgaatgtggcaacaacccatgcctgccaaatccctgcaagaat
ggagccacgtgtcaggtcaaagaggcagagatgttccattgccagtgcagtaaaggattc
tggggtccaacttgtgccgatgtccatgacccatgcgagcccagcagatgccatccgtcc
tcccgctgccaggcacttcccgagggaggctacaagtgtgaatgtccgatgggtcgcgaa
gggaggcactgcgagacagttgcggagaggagaggggcctacatgccgctatttaatgga
gactcttacctcgagctcaagggactgcatctttacggacatgatctgcgtcaaaaagtc
agcatgacagtcgttctgatggccaatgactccaacggcctgatcttctacaacgggcaa
aaatctgacggaaaaggagacttcatctctttgtccctggacgaggggatcctggagttc
cgctatgaccttggcaaggggcctgctaccatcaggagtaaagaaccaatcaggctcaac
atgtggaacaccatcagcttggagcgctccaatcgcaaaggagagatcatggtgaacaag
aaggacgctgttcgaggagaggcaccgaaatcacgcaagaatctccatgtggacctcaac
ctgaaagaatctctctttgttggtggggctcctgactatagccgacttgcacgaagcgcc
gcactcacagaaggcttcaagggaacgatccaaaagatcattttgatgggcacgccaatc
ctcagagaagagaacgccctgcgctctcaaaatctggccatgttccaggagcacgcatgt
tcccgagaaccctgccacaacggggggcgctgcaacccccagctggacacttatgagtgc
gtgtgcctcagtggctactctggcggacactgtcagaacaccatttatgagaagtctgcc
gggactgagactgaggccattgcctttgacgggcggacgttcatcgaataccacaacgcc
gtcaccaggagccaactgaccaatgagatcccagatcccgagtctgtggagaacccgtct
gaccagagtgaaaaggctctgctggtgaacaaattcgagctccgcatccgcacggaggcg
actcagggcctcgtgctgtggagcgggaagggcgtggagcgttccgactacatcgccttg
gccatcgtggacggccgcgttcagatgatgtatgacctgggctccaagccggtggtgctg
cgctcctcggtgcgcgtcgacaccaaccgctggatacgcatcaaggcgagcagagcgcta
cgagatggatcgctacaagtcggcaatgaggcggcagtgacgggatcatcgcctttggcg
gcaactcagctggacacagacggagcactttggttgggcggtctggaagaagtggccgtg
gcccgtcggctgcccaaggcctacagcacgggctttgtgggctgcatcaaggacgtggtg
gtggacggcgtggagctccacctggtggaggacgccttgaacagcccccaaatattacac
tgtccggcggccaaataa
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