Hirundo rustica (Barn swallow): 120750763
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Entry
120750763 CDS
T09369
Symbol
DSE
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120750763 (DSE)
Enzymes [BR:
hrt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
120750763 (DSE)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
Motif
Other DBs
NCBI-GeneID:
120750763
NCBI-ProteinID:
XP_039915675
LinkDB
All DBs
Position
3:complement(67144346..67178834)
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AA seq
959 aa
AA seq
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MRTHTRGAPSVFFIHVVCFAFACGAREDQDRMVPFVNANYDSYPMLYFSKGDMETLRLQA
STTHQHIAARLIEAVQTMLSNPLEYLPPWDPKEFSARWNEIYGNNLGALAMFCVLFPENM
EAINMAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYNYLSKIQQERFLEV
IANASGYMYETSYRRGWGFQYLHNHQPTNCVALLAGSLVLMNQGYLQEAYLWTKQVLAIM
EKAVVLLQEVTDGSLYEGVAYGSYTTRSLFQYMFLVQRHFDISHFSHPWLKQHFAFLYRT
VLPGFQRTVAIADSNYNWFYGPESQLVFLDKFVMRNGSGNWLAEQIRRNRVVEGPGTPSK
GQRWCTLHTEFLWYDASLRSVPPPDYGVPKLHYFEDWGVVTYGSALPAEINRPFLSFKSG
KLGGRAIYDIVHKNKYKEWIRGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYTFL
NNVLMFSPAVSKSCFSPWEGQITEDCSSKWLKYKHDLAGDCQGRVVAATERSGVVFIRGE
GVGAYNPKLKLRKLQRNLILLHPQLLLLVDQIHLEDDSPLEAATSFFHNVDVPFEETVVD
DVHGAFIRHRDGIYKMYWMDDTGHSEKATIASRMYPRGYPYNGTNYVNVTTLLRHPVTRA
IYLFIGPSVDVQSFTVRGDSPQLDVFVTTGEHAYAVYLWPVEDGSRSAFAQVIADRQKIV
FDQASAIRSSTVPEVKDYIGIVERNLQHFKPVFKQLEKEILSRVRNKASFRKTAERLLRF
SDKRQTEEAIDRIFAISQRQQQQQRGRAKKNRKVAKGYKFVDAVPDIFAQIEVNERKVRQ
KAQTQAQKELPVDEDEEMKDLLDFADITYVKHKTGVSIKGRSGLAQMVATARSAPSISPS
YTRLFLILNIAIFFVMLAMQLTYFQKAKRLHGQRCLYAILLVDSCILLWLYSSCSQSQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcacacacggggagccccaagtgtgtttttcatacacgtggtttgctttgcc
tttgcctgcggcgcccgggaggaccaagacaggatggttccttttgtcaatgccaactat
gacagctaccccatgctctacttctccaagggggacatggagactctgcggctccaggcc
agcaccacgcaccagcacatagcagctcgtctgatcgaagcagtgcaaaccatgctgtca
aatcccctggagtaccttcctccctgggacccaaaggagttcagcgcccgctggaatgaa
atttatggcaacaacctcggggccctggcaatgttctgcgtgctcttccctgaaaacatg
gaggccattaatatggccaaggattacatggagaggatggcggctcagcctagttggcta
gtgaaggatgccccctgggatgaagtccctcttgctcactccttggttggttttgccact
gcttatgacttcttgtacaactaccttagcaagattcagcaggagagatttcttgaagta
attgccaatgcctcaggatatatgtacgaaacatcataccgacgtggatggggtttccag
taccttcacaaccaccagcctaccaactgtgtggccctgctggctggaagcctggttctg
atgaatcaaggctaccttcaggaagcttacttgtggaccaagcaagtgttggcaatcatg
gagaaggcagtagtcctgctgcaggaggtcacagatggctccctctatgaaggggtggct
tatggcagctacacaaccagatcactgtttcagtacatgtttcttgtccaaaggcatttt
gacatcagtcacttcagccacccctggctcaagcagcactttgcatttctgtacaggact
gtcctgccagggttccagagaactgtggccatcgcggattccaactataactggttctac
gggccggagagtcagctggtgtttctcgacaaatttgtcatgcgtaatggcagtgggaac
tggttggcagagcagatcagaaggaaccgagtggtggagggcccaggcacaccatccaaa
gggcagaggtggtgcactctccacactgaatttctctggtatgatgcaagtttgcgctct
gtacctccaccagactatggggttcctaagctgcattattttgaggactggggagtggta
acttacggaagtgctttgcccgctgaaatcaacaggcctttcctttccttcaagtcagga
aagctgggaggacgtgcaatatatgatattgttcataagaacaaatacaaagagtggatc
aggggctggaggaactttaatgctggccatgaacacccagaccagaactcctttactttt
gctcccaatggtgtacctttcataacagaagctctgtatgggccaaaatatactttttta
aacaatgtgttgatgttttcccctgctgtgtctaagagctgcttctccccatgggaaggg
caaattacggaagactgttcctcaaagtggcttaaatataaacatgacttggctggcgac
tgtcagggacgagtggttgccgccacagagagaagtggggtagtttttatcagaggagaa
ggagtgggtgcatacaatcctaaactgaagctgagaaaattgcaacgaaaccttatactt
ctccatccccagcttctcttgctagtggaccaaatccacctagaagatgacagccctctg
gaggcagcaaccagtttcttccacaatgtggatgtgccttttgaagaaacagttgttgat
gatgtccatggggcctttattaggcaccgtgatgggatatataagatgtactggatggat
gacactggccacagtgagaaagccaccattgcctcaaggatgtatccccggggctacccc
tacaatggaacaaactacgtgaatgtaacgaccctgctgcggcaccctgtcacgagggcc
atttaccttttcattgggccctctgtggacgtgcagagcttcaccgtgcgtggagattcc
ccgcagctggacgtatttgtgaccactggtgagcacgcctacgccgtgtacctgtggccc
gtcgaggatggctcccgctctgcctttgcacaggttattgcagaccgccagaaaattgtc
tttgaccaagcctctgccattaggagctccacagtgccagaagtgaaggactacataggg
atcgtggagaggaatctgcaacattttaagcctgttttcaagcagcttgagaaggagatc
ctgtctcgtgtacgcaacaaggccagctttaggaagactgctgagcgcctgctgaggttt
tcagataagagacagacagaggaggccattgacaggatatttgcaatctcacagaggcag
cagcagcagcagcgtggcagagcaaagaaaaacagaaaggtagccaaaggctacaaattt
gttgatgccgttcctgacatttttgcacaaattgaggtaaatgaaagaaaagtgcgacaa
aaggcacagactcaagcacagaaagagttgcctgtagacgaagacgaggaaatgaaagat
cttctggattttgcagatatcacttatgtgaagcacaaaactggggtgtcaatcaaaggc
cgatcagggctggcacagatggtggcgactgctcgaagtgccccatcaatatcaccttct
tatactcgcctctttctaattctcaacattgctatcttttttgtcatgttagcaatgcag
ctcacgtatttccagaaggccaagagactgcatggccaaagatgtctgtatgcaatactt
ttagtagacagctgtatattattgtggctgtattcttcctgttctcagtcacaatgttag
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