Hippoglossus stenolepis (Pacific halibut): 118099343
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Entry
118099343 CDS
T08308
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118099343 (dse)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
118099343 (dse)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
118099343
NCBI-ProteinID:
XP_034999743
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All DBs
Position
20:1937626..1962915
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AA seq
1003 aa
AA seq
DB search
MPGFVKKKKALRRILADFFKILLFPLGSLSAELLWQCHSLPSDEMMTTYTRGAPTVFFLS
LLWPLLVPTVVAATEGDPSEGIPFMGGNYDGHPMLYFNRGNVEELQYAAAGTHRDMARRI
REAGEIMLERPEEYLPPWSPAEFSARWNEVYGNNLGVLSMFCLLYPHRAGALDLAKDYME
RMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQERFLQVIGNASRLMYEK
SYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQVLSIMEKSMVLLQDVT
DGSLYEGVAYGTYTTRSLFQYMFLVQRHFAISHFDHPWLLKHFAFLYRTILPGFQRTVAI
ADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADVIHQNRVMEGPGQAGKGQRWCTLHTEF
IWYDPSLISKPPSDFGTSQLHYFEDWGVVTYGSALPADTNNTFVSFKSGKLGGRAIFDIV
HRNKYKEWIKGWRNFNAGHEHPDQNTFTFAPNGFPFITEALYGPKYTLLNNAVLFGSAVS
GSCFKPWAGQVTETCDSKWLKYKVGLAADTQGRVEAAMERQGMVFIRGEGRSAYNSELKI
RNFQRNLLLLHPQLLLLVDHIHLDPDSPTRAMSAFFHNTDLPFQGTKVDGVHGAFVSHGE
DKYKMFWMDDTGYSNKGVIGYWNYPRGYPYNGSNYVNITMPLRYPYTRVAYIFFGPGVDI
QSFSLRGDDQRVDIYLATKDHTYTIYLLTGEVTSKPLFSMVLLNNKKIVFEKAAVADDSS
PEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTNSFRKTAERLLQFSDKKKTEEVIE
KMFAMSKKQGKGKGGKKVNLGEKLSESLPDIFAQIEVNEKKERQKTSKRTYEDSPEEGDA
DSRAFMDYTDSRKNRKGGFVKGRKFKEVHMVGTAGSEGFTSTASYIRLFLLLNTATFFLL
LAVLLTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQC
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctttgtaaaaaaaaaaaaagctttgcgcagaatattggctgactttttcaaa
atccttctcttccccctcggctccctctcagctgagctcctttggcaatgccacagtctc
ccctctgatgagatgatgacaacctacacccgcggggcccccacagtcttcttcctaagt
cttctgtggcccctgcttgtcccgacggtggtggctgcgacggaaggggaccccagcgaa
ggaatccccttcatgggaggcaactacgatggacatcccatgctgtacttcaaccggggg
aatgtggaggagctgcagtacgcagcggcggggactcatcgggacatggcgaggaggatt
cgtgaggctggggaaataatgctggagcgcccggaggagtacctgccaccctggagcccc
gcggagttcagcgcccgctggaacgaggtgtacgggaacaacctgggtgtgctgtccatg
ttctgcctgctgtacccccacagggccggggccctcgacctggccaaggactacatggag
aggatggcggctcagcctagttggctggtcaaagatgccccctgggatgaagttcctttg
gcgcactcattggtcgggttcgccaccgcttacgacttcctgtatgagtacttgaacaag
ggccaacaggagcgatttctgcaggtgatcggcaacgcgtcacgcctgatgtacgagaag
tcctacgtccgaggctggggcttccagtacctgcacaaccatcagcccaccaactgtgtg
gctctgctcacaggaagcctggtttacatgacacaaggttaccttcaggaggcctacctg
tggaccaagcaggtcctgtccatcatggagaagtccatggtcctcctgcaggatgtgacg
gatggctccctgtatgaaggcgtggcctatgggacttacaccacccgctctctgttccag
tatatgttcctggtgcagcgccactttgccatcagccacttcgaccacccgtggcttctc
aaacactttgccttcctctacaggactatcctgcccggatttcagcggactgtagccatt
gcagattccaactacaactggttctacgggccggaaagccagctggtcttcttggatcgc
tatgtgttgcgtaatggcagtggaaactggctggcagatgtgattcatcaaaacagggtg
atggaagggccagggcaggctggaaagggccagcggtggtgtactctccacacagagttc
atctggtatgacccgagcctgatctccaagcccccgtcagattttggaacatcccaactc
cactactttgaggactggggtgtggtcacatatggcagtgctttacctgcagacaccaac
aacacctttgtctccttcaagtcagggaagctgggaggacgcgccatctttgacattgtt
cacaggaacaagtacaaagagtggatcaaagggtggaggaactttaacgctggccacgag
cacccagatcagaacactttcaccttcgcacccaatggtttcccatttataactgaggca
ctatatggacccaagtacactttgttaaacaatgcggtgttgtttggctcggcggtctca
gggagttgctttaagccgtgggctggacaggttacagagacctgtgactctaagtggttg
aagtacaaagtggggctggcggctgatacccagggcagagtcgaagctgctatggagaga
cagggaatggtcttcatccgaggtgagggacgttctgcgtataattctgagctaaagatc
agaaactttcagaggaaccttctccttcttcacccacagctcctcctcctcgtggaccac
atccacctggatcctgacagcccaaccagggccatgagtgccttctttcacaacaccgat
ctgccattccagggcacaaaggtagatggtgttcatggagcatttgtgtcacatggtgag
gacaagtataagatgttctggatggacgacactggctacagtaacaaaggagtgataggt
tactggaattaccctcgagggtacccatataatggttctaactatgtgaacatcacaatg
ccattaaggtacccttacacaagggtggcctacattttttttggaccgggggtggacata
cagagcttcagcctgcgtggtgatgaccagagagtggatatttacctggccaccaaggat
cacacttacaccatctacctgcttactggagaggtcaccagcaagcctctgttctccatg
gtgctgctgaacaacaagaaaatcgtattcgagaaggccgcagttgcggatgacagctcg
ccagaggaagtagaggagtacgtcaacgtgatggaggacaacctccagcacgtcaagcct
gtttttcagcagatggagagacacatcctcggacgggttctgaacactaacagcttcaga
aagactgcagagcgcctcctgcagttctctgacaaaaagaagacagaggaggtcattgag
aagatgtttgctatgtccaagaagcagggcaagggtaaaggggggaagaaagtcaacctt
ggggagaagctttctgagagtctccctgacatttttgcacagattgaagtgaatgagaaa
aaggagagacagaaaacctcaaagcgtacgtatgaggacagtccagaagagggggacgca
gactcccgggcctttatggattatacagacagtcgcaaaaatagaaaaggtggctttgtc
aagggccgcaaattcaaagaggttcacatggtgggcacagcagggagtgaaggtttcacc
agcacagcctcttacataagactcttcctccttctgaacacggccaccttctttttactg
ctggctgtgttgctgactcgctttcagaggggtcgaagtttgcacacacagaggtgtttc
tacaccatccttctgatcgactgcttcatcttactgtacctctactcctcctgctctcac
acacagtgctaa
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