Ictalurus punctatus (channel catfish): 108259085
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Entry
108259085 CDS
T04658
Symbol
si:dkey-1h24.6
Name
(RefSeq) T-cell-specific surface glycoprotein CD28 isoform X1
KO
K06470
CD28 antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
ipu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108259085 (si:dkey-1h24.6)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108259085 (si:dkey-1h24.6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108259085 (si:dkey-1h24.6)
CD molecules [BR:
ipu04090
]
Proteins
108259085 (si:dkey-1h24.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
ig
V-set
I-set
V-set_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
108259085
NCBI-ProteinID:
XP_017313746
Ensembl:
ENSIPUG00000013716
UniProt:
A0A2D0Q7Q5
LinkDB
All DBs
Position
26:9728054..9732432
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AA seq
236 aa
AA seq
DB search
MKTSWLLATLLPLFLFSCALPEKQCQCKDNVLKIQRVTVHGNVSVPCPMFTAVEMTFKLH
KGQNITATVTYVNASHKSSPEPLGSKMYHSVKDDNTTHFLLYNVTMDATGLYTCTAEKSY
PPPMVTIQEEPQTIVIVENHGCVQNSQRMDPSASHLPLWVGFGILSVYCLIITCIALSLR
FRLKREDMSTHDYMNMKPRTRRKKQGIHHPTHHSWYNDTTNGTAVSKKLPTKGTSV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttcctggcttttggcgaccctcctgccccttttcctcttcagctgtgccctc
cctgagaaacagtgccagtgtaaagacaatgtcctaaaaattcagcgtgtaacagtccac
ggcaatgtctccgtgccctgtcccatgtttacagctgtggagatgacgttcaagttgcac
aagggacaaaatattactgccaccgtcacgtatgtgaatgcctcacataagagcagccca
gaacccctaggcagcaaaatgtatcactctgtaaaagatgacaacaccactcattttctc
ctttacaatgtgactatggatgcaacgggcttgtacacatgcacggctgaaaagtcctac
ccccctcccatggtcaccatacaagaggaacctcagaccatcgtgatcgttgaaaaccat
gggtgtgtgcagaacagccaaagaatggatccttctgccagtcatctgcccctatgggta
gggttcgggattctgagtgtatattgcctgattatcacatgcattgcattatcactgaga
ttccgtctaaaaagagaggacatgtccacacatgactacatgaacatgaagccacgaaca
cggaggaagaagcaaggcatccatcacccaacacaccacagctggtacaacgacacgacc
aatggcacagcagtcagcaagaagcttccaactaaaggaacatctgtttaa
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