Pantoea rwandensis: LH22_18855
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Entry
LH22_18855 CDS
T03331
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
kln
Pantoea rwandensis
Pathway
kln00540
Lipopolysaccharide biosynthesis
kln01100
Metabolic pathways
Module
kln_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LH22_18855 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kln01005
]
LH22_18855 (lpxC)
Enzymes [BR:
kln01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
LH22_18855 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
kln01005
]
Lipid A
LH22_18855 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AIR87417
LinkDB
All DBs
Position
complement(3985852..3986769)
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDQGVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFVYLLMDAGV
EELNSAKKFVRVKQTVRVEDGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYQLNFSAE
AFVRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNVIGAFSAFKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPLAFKAP
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgttcaggcgactggtgtcggtttacatacc
ggcaagaaagtcacgctgaccttacgccctgcgtcggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgatttcccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaatgatcaaggcgtgcgtatatcgacggttgaacacctg
aatgctgcattggctggcttgggtatcgataacatcattgttgaagtcgatgcgcccgaa
atcccgattatggatggcagtgccgcgccttttgtctacttgctgatggatgcaggcgtc
gaagagctgaacagtgcgaagaaattcgtacgcgttaagcagacggtgcgtgttgaagat
ggcgataagtgggccgagatcaaaccctataacggtttctcactcgactttactatcgac
ttcaaacatccggcaattgactcaagctcgcagcgttaccagttgaacttctcggctgag
gcgtttgttcggcaaatcagtcgtgcgcgcacctttggttttatgcgtgaaatcgaatat
ctgcagtctaaaggcctgtgcctgggcggtagcttagattgtgcgattggtcttgatgat
ttccgcgtactcaacgaagacggtctgcgctttgaagatgagttcgttcgtcacaaaatg
ctggacgcgatcggcgatctgtttatgtgtggccacaacgtgattggcgctttctctgcg
ttcaaatctggtcatgctttaaacaataaattgctgcaagcggtattggcgaagcaggaa
gcctgggaatgggcaaccttcgaagacgaagctgaactgccactggcattcaaagcacca
aatttagtcctggcgtaa
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