Kryptolebias marmoratus (mangrove rivulus): 108239464
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Entry
108239464 CDS
T05608
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108239464 (tcf3a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
108239464 (tcf3a)
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Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
108239464
NCBI-ProteinID:
XP_017277662
UniProt:
A0A3Q3ABV6
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Position
LG20:13857602..13881184
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AA seq
646 aa
AA seq
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MAAVETDKELSDLLDFTAMFEPPVSNGKNGPTTLASRQFVAPAGLSSRHNPHNHKLEQDP
QRGISRVPNSAHQHDEKSGSSPWGPGEQNSPTFTQGRGYEDGLYSERENMASAPVFGSGV
IGKAERGPYSSFGSQPGFMPSEIPMNSQDNLSPSAVKSTSQFYSSYERSNTRRRPSQDPI
ESQPKKIRKVPPGLPSSVYPSATGEDFNRDSACYPSSKAGNVYTSPFYMQDGLHPPPPSA
PWGSAGSMVQPGYSAVLGNSPHLGQHGPFTAINPQDRLKRQPLPLSPQNYPLHGSEVNGA
HPAGFHSGSSSFGVPNHTPPIAGTETILANQGVVPGSSGDEIGKALASIYPSDTNSNAFP
PSPSTPSGSPQAVSGSASQWTRSSGQATPSPNFEGGVQSLQSKIEDRLDEAICVLQRHAS
GQGGLTGLGLTPGFSSAALGLASRLPGLVSSHHEDSAGLPSSGGLLHHGSASVHSGSHLT
VLPGSLARSVGALIKREEREDDENCSVTDKSEDERKDMKARLRTSSLDDVDDDDDDEDLP
VEIKAEREKARRLANNARERLRVRDINGAFKELGRMCQLHLSYEKPQTKLIILQQAVNVI
LNLEQQVRERNLNPKAACLKRREEEKVSGLDHQMQLGGGHPGDGHM
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtggaaacggataaggagctcagcgacttgctggattttactgcgatgttt
gaacccccagtttcaaatggtaaaaatgggccgactactctcgccagcagacaatttgta
gctcctgcgggactttccagtcgccacaaccctcataaccataagctcgagcaagaccct
cagagaggaatttccagagtgccaaattcagcccaccagcatgatgaaaagagcgggtcc
agtccttggggaccaggagaacaaaacagtccaactttcacccagggaaggggttatgaa
gacggcctttacagtgagcgagagaacatggcctctgccccagtatttggatcaggggtt
attggaaaggcagagcgaggaccatactcctcatttggatcacagccgggttttatgccc
agtgaaatacccatgaacagccaagataacctgtctccgtctgctgtgaagtccacttcg
cagttttattcatcatatgagcgaagcaacactcgcaggagaccctcacaggaccccatt
gagtcacagccaaaaaagatcaggaaggtgccccctggcctgccctcctcagtttatcca
tcagccacaggggaggactttaatcgagacagtgcttgctacccttcctccaaagcagga
aatgtctacacatcaccattctacatgcaagacggcctccacccgccgccgccctctgct
ccttggggctccgccgggtcgatggttcagcctggttattctgccgtgttgggcaactcc
ccccatctgggccagcacggacctttcactgccatcaaccctcaagacagactgaaacgg
cagccccttcccctttctccccaaaactaccccctgcatggcagcgaggtgaacggagct
catcctgctggtttccactccggctccagcagcttcggggtcccaaaccacacaccccct
atcgctggcactgaaaccattctggcaaatcagggtgtggtacccggaagttcaggcgat
gagattgggaaagccctggcatcaatctatccttcagacaccaacagcaacgcgttcccc
ccgtctccgtccacgccctctggctcacctcaggccgtttcaggctctgcatcccagtgg
actcggtcttctggccaggccacaccttcacctaacttcgaaggtggagttcagtccctg
cagagtaaaatagaggaccgcctcgatgaagccatctgtgttcttcagcgacacgccagc
ggacagggcgggttaacaggcttagggctgacaccaggcttcagcagcgcagcgcttgga
ttggccagtcgcctgccagggctggtttccagccaccatgaggactctgctggtctgccc
tctagtggaggacttttacatcacggctctgcgtcggttcattcaggctctcatcttaca
gttctgcccggcagcctggctcgttccgttggcgccttgatcaaacgagaggagagggag
gatgatgagaactgctctgttacagacaagtcagaggacgaaagaaaagacatgaaggcc
cgccttcgaacaagtagtctagacgatgtggatgatgatgacgatgacgaagacctgccg
gtggagatcaaggccgagcgggagaaagcgcggaggttggcgaacaatgcccgcgagcgg
ctccgcgtgcgggacatcaacggggcttttaaggagctgggccgcatgtgtcagctccat
ctgagctatgaaaaaccccaaaccaaattgatcatactgcaacaggctgttaatgttata
ctcaacctggagcaacaagttcgagagcgtaatttgaatccaaaagccgcctgcctcaag
aggagagaggaggagaaagtttcaggtttggaccaccaaatgcagcttggtgggggtcac
cctggggacggacacatgtga
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