Lactobacillus amylolyticus: B1745_01820
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Entry
B1745_01820 CDS
T05057
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lamy
Lactobacillus amylolyticus
Brite
KEGG Orthology (KO) [BR:
lamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lamy03019
]
B1745_01820
03009 Ribosome biogenesis [BR:
lamy03009
]
B1745_01820
Enzymes [BR:
lamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1745_01820
Messenger RNA biogenesis [BR:
lamy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1745_01820
Ribosome biogenesis [BR:
lamy03009
]
Prokaryotic type
rRNA helicases
B1745_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
ARD07389
UniProt:
A0A1V0JEU5
LinkDB
All DBs
Position
345389..346750
Genome browser
AA seq
453 aa
AA seq
DB search
MNNTFTDSRIKPELQAGLEKIHFTKPTKVQERVIPTMLSRQNVIVQSATGSGKTHAYLVP
VFNDIDLSSDYVQAIITAPSRELADQLYQVAKSLRKASGLNISIMHLAGGTDRERQLEKI
ENKKPQLVIATPGRLLDFVQKKIFAVDAVKDFIIDEADMTLDMGFLNDIDQVAAKLPKDV
LFAAFSATIPVKLANFLRKYMAHPDEIIIDNPAIIAPTIKNDLLDVGSKDKKNVLYQLLT
MGQPYLALVFANTKQKVDELTKFLQDQGLKVAKIHGGITERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEVPRNLEFVIHRIGRTGRNGLPGHAVTLIREEEMNRIEELE
KMGVHFDFVEIKKGELVPRKHYRRRDNREAKNRKLDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEVRKAKRQRRRRREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacttttactgattcaagaattaaacctgaactgcaggccgggcttgaaaaa
attcattttactaagccaactaaagttcaggaacgagttatcccgaccatgctttcacgg
caaaatgtgattgtacagtcagcaacaggttctggtaagacgcatgcttatctagtaccg
gtttttaatgatattgatctgtcttctgactatgttcaagcaattattactgcacctagt
cgtgaattagccgatcagctttatcaggttgccaagagcctgcgcaaggcttcaggattg
aatatttcaatcatgcacctggctggaggaactgaccgggaacgtcaattagaaaaaatc
gaaaataaaaaaccgcaactggttattgcaacgccaggtcgtttgctggattttgtccaa
aagaagatctttgctgttgatgccgtgaaggactttatcattgatgaagctgatatgact
ttggatatgggcttcttaaatgatatcgatcaagtagctgctaagttgccaaaggatgtg
ctttttgcagccttttcagcaactattccagtgaagttggccaactttttacgtaagtat
atggcgcatcctgacgaaattatcattgataatccagcaattattgcgccaacaataaaa
aacgatcttttggatgttggttcaaaagataagaagaacgttctttatcaattattaacg
atggggcagccatatttggccttggtttttgccaatacaaagcaaaaagttgatgaatta
accaagtttttgcaggatcaaggattaaaggtcgctaaaattcacggcggcatcactgaa
cgtgagcgtaaacggacgttgcgccaagttgaacaggggcaattccaatatgtagttgcc
agcgacttggcagcccgtggtcttgacattgatggcgtaagtttagttatcaattatgaa
gttccgcgcaatttggaattcgtcattcaccggattggcagaacaggtcgcaacggtttg
ccaggtcacgcagttactttgattcgcgaagaagagatgaaccgaattgaagagctggaa
aagatgggcgttcattttgattttgttgaaattaaaaagggcgaactggttcctcgtaaa
cattatcgccgtcgcgacaaccgtgaagctaagaatcgcaagcttgatacaaaactggtt
ggttatgttaaaaaagaaaaacgtaaacgcaagccaggctacaagaagaaaatcaaacgt
gctattcaagaagacaatcgtcaaaagcgcaagcttgaacagcggcatgaggttcgcaaa
gctaagcggcaacgtcgccgtcggcgtgagcagggacgttga
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