Loxodonta africana (African savanna elephant): 100661613
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Entry
100661613 CDS
T04351
Gene name
DDX58
Definition
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
3.6.4.13
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04064
NF-kappa B signaling pathway
lav04622
RIG-I-like receptor signaling pathway
lav04623
Cytosolic DNA-sensing pathway
lav05160
Hepatitis C
lav05161
Hepatitis B
lav05162
Measles
lav05164
Influenza A
lav05168
Herpes simplex virus 1 infection
lav05169
Epstein-Barr virus infection
lav05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100661613 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100661613 (DDX58)
04623 Cytosolic DNA-sensing pathway
100661613 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
100661613 (DDX58)
05160 Hepatitis C
100661613 (DDX58)
05171 Coronavirus disease - COVID-19
100661613 (DDX58)
05164 Influenza A
100661613 (DDX58)
05162 Measles
100661613 (DDX58)
05168 Herpes simplex virus 1 infection
100661613 (DDX58)
05169 Epstein-Barr virus infection
100661613 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lav04054
]
100661613 (DDX58)
Enzymes [BR:
lav01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
100661613 (DDX58)
Pattern recognition receptors [BR:
lav04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100661613 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
Helicase_C
DEAD
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
100661613
NCBI-ProteinID:
XP_010586184
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MTAEERRNLRTFGDYVRKTLDPTYILGYMTPWLREDEMQYIQAEKNNKGTVEAASAFFNF
LVELKEEGWFRGFLDALQRAGYTGLYEAFESWDFQKIEKLEEHRLLLRRLQPEFKTSINP
LDILPEISQCLINQECEEIRQVCFNKGSMAGAEKMVECLVRSDKENWPKALKLALEKEEC
NFNELWIVEKGAEDVEIKDLGDGEMETSEVQIFYQEEPEYQNLSQSSCPPSEVSHTNLYS
PLKPRNYQLELALPAQNGKNTIICAPTGCGKTFVSILICEHHLKKFPQGQKGKIVFFAVQ
IPVYEQQKSVFSKYFERLGYTVAGISGATSEEVPVRQIVENNDIIVLTPQILVNNLKDGI
IPSLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGVGDAKD
ITDAKMYICKLCAALDTSVIATVKDNLKELEEIVNKPQKFFRKVETRTTNKFKCIISQLM
VEIEKMAESVFEELGTLTLESLSHIQNREYGTQKYEQWIIAVQKACMVFQMPDKNEESRI
CKALFLYTSHLRKYNDALMINEDARIKDALDFLKDFFTNVRAAGFDEIEQDLTQRFEEKL
QELEYVSMDPNNENPKLQDLSFILQEEYHVNPDSRTILFVKTRALVDALKKWIEENPKLS
FLKPGILTGRGRTNQKIGMTLPAQKCVLDTFRSNSDSKILIATSVADEGIDIAQCNLVIL
YEYVGNVIKMIQTRGRGRARGSKCFLVTSKADVIEKEKINIYKEKLMNDSILSLQELDEA
EFKKKLLIIQNQEKFIRDNEGKAKPEPDKKNKKLLCRKCKAFACYTVDIRVVEESHYTVV
GDAFRECFVSKPHPKPRTYGSFEKKAKIHCARQGCSHDWGIYVKYRTFEIPVIKIESFVV
EDIATGAQSLYAKWKDFHFEKIPFDAAEMSK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaggagcgcaggaatctgcgcaccttcggagactacgtcaggaaaaccctg
gaccctacctacatcctgggttatatgaccccctggttgagggaagatgagatgcaatat
attcaggctgagaaaaacaacaagggcactgtggaggctgcctcagcttttttcaacttc
cttgtggagctcaaggaggaaggctggttccgtggctttttggatgccctgcaacgtgca
ggttatactggactttatgaagcctttgaaagctgggatttccaaaaaattgaaaaattg
gaggagcatagattgcttttaagacgtttacaaccagaattcaaaaccagtattaatcca
ttagatattcttcctgaaatatcccagtgtttaattaatcaggaatgtgaagaaattaga
caggtttgtttcaacaaggggtcgatggcaggtgcggagaaaatggttgaatgcctcgtc
agatcagacaaggagaactggcccaaagctttgaaacttgctttggagaaagaagagtgc
aacttcaatgaactgtggattgtagagaaaggtgcagaagatgttgaaattaaagatctt
ggggatggtgaaatggaaacttctgaagtacaaatattctaccaggaagaaccagaatac
cagaatcttagtcagagttcatgtccaccttcagaagtgtctcatactaacttgtacagc
cccttgaagccaagaaattaccaattagagctcgctttgcctgctcagaatggaaaaaat
acaatcatatgtgctcctactggttgtggaaaaacctttgtttccattcttatatgtgaa
catcatcttaaaaaatttccacaaggacaaaaagggaagattgtcttttttgcagttcaa
atcccagtatatgaacagcagaaatccgtgttctcaaaatattttgaaaggcttgggtac
acagtcgcaggcatttctggagcaacatctgaagaggtcccagtgagacagattgttgag
aacaatgacatcatcgttttaactccacagattcttgtgaacaaccttaaagatgggatt
attccatcactctctgtctttactttgatgatattcgatgaatgccacaacaccagtaaa
caccacccatacaatatgatcatgtttaattatctagatcagaagcttggaggatcttca
gacccactgccccaggtcatcgggctaactgcttcagttggcgtcggggatgccaaagac
ataactgatgccaagatgtatatctgcaagctgtgtgctgctcttgacacatcagtgata
gcaacagtcaaagacaacttgaaggaactggaggaaattgttaataagccccagaagttt
ttcaggaaagtggaaacacggactaccaacaaatttaaatgcattatatctcaactgatg
gtggagatagagaagatggcagagagtgtgtttgaagaacttggtactctaactctcgaa
agcttatctcatattcaaaatagggaatacggtacacagaaatacgaacaatggattatt
gcagttcagaaagcgtgcatggtgtttcagatgccggacaaaaatgaagagagcaggatt
tgtaaggcattgttcttgtacacttcgcatctacggaaatataatgatgccctcatgatc
aatgaggatgcccgaatcaaagatgctttggatttcctgaaagacttcttcactaatgtc
cgagcagcaggatttgatgagatagagcaagatctcactcagaggtttgaagaaaagctt
caggaactagagtatgtttccatggatcccaacaatgagaaccctaaactccaagacctt
tccttcatcttgcaagaggagtaccatgtaaacccagattcaagaaccattctgtttgta
aaaaccagagcacttgtggatgctttaaagaaatggattgaagaaaatcctaaactcagc
tttctcaaacctggcatattgactggacgtggtagaacaaatcagaaaataggtatgacc
ctgccagcacagaagtgtgttttggacacattcagatccaacagtgatagcaagattctg
attgccacctcggttgcagatgaaggcattgacattgctcagtgcaatctggtcatcctg
tatgagtatgtgggcaatgtcatcaaaatgattcaaaccagaggtagaggaagagcaaga
ggtagcaagtgcttccttgtgactagtaaagctgatgtaattgaaaaagaaaaaataaac
atatacaaagaaaaattgatgaatgactccattttaagccttcaggaattggatgaagca
gaatttaaaaaaaagcttctcattatacagaatcaagaaaaattcatcagagataatgaa
ggaaaagcaaaacctgaacctgataagaaaaataaaaaactgctctgcagaaagtgcaaa
gcttttgcatgttatacagttgatataagagtggttgaggaatcccattacactgtggtt
ggagatgcttttagggagtgctttgtgagtaagccacatcccaaaccaaggacgtatggg
agttttgagaagaaagcaaagatacactgtgcccgccagggctgcagccatgactgggga
atctatgtgaagtataggacatttgagattccagttataaagattgaaagttttgtggtg
gaggatattgccactggagctcagagcctgtatgcaaagtggaaggactttcattttgag
aagataccatttgatgctgcagaaatgtccaaataa
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