KEGG   Latimeria chalumnae (coelacanth): 102353765
Entry
102353765         CDS       T02913                                 
Symbol
BRCA1
Name
(RefSeq) BRCA1, DNA repair associated
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03440  Homologous recombination
lcm03460  Fanconi anemia pathway
lcm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102353765 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    102353765 (BRCA1)
   03460 Fanconi anemia pathway
    102353765 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcm01009]
    102353765 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102353765 (BRCA1)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102353765 (BRCA1)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102353765 (BRCA1)
Enzymes [BR:lcm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102353765 (BRCA1)
Protein phosphatases and associated proteins [BR:lcm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102353765 (BRCA1)
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102353765 (BRCA1)
  Multi subunit Ring-finger type E3
   BRCC complex
    102353765 (BRCA1)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     102353765 (BRCA1)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     102353765 (BRCA1)
    BRCA1-A complex
     102353765 (BRCA1)
    BRCA1-B complex
     102353765 (BRCA1)
    BRCA1-C complex
     102353765 (BRCA1)
    BRCA complex
     102353765 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     102353765 (BRCA1)
SSDB
Motif
Pfam: BRCT BRCT_assoc zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 BRCT_2 zf-RING_10 zf-RING_5 zf-Nse zf-RING_6 zf-RING_4 zf-ANAPC11 zf-rbx1 TRAF3_RING
Other DBs
NCBI-GeneID: 102353765
NCBI-ProteinID: XP_014352863
LinkDB
Position
Un
AA seq 1965 aa
MALSKCSIEEVQRVLSMMHKNLECPVCLELLREPISTKCDHRFCRFCISKLLNKKKKGAA
QCPLCKSEVTKSNVQESPRFKLLVEGLLKTIQAFEIDTGYACKYCKTVILVSWQEEQSKL
QLPDTMVIKVSQRNKQQKLNNRVVPIYLEAGSDSSEELLFKKKTNAESHCIMNSKAIECE
AHQEKVVERVEANCRNMKDDGDNTTCMVEAEELKVSTIVDHGFSDDDFASTFKRNGSFDG
ESGGEILSLTEDICGEDQCILDNNQEINASHENRDPVTNIGFSQSDGTSFITDANAWSIE
NGGKSKYSEMDKGQKYNLDESKGKLGVIKHLEEVNENYNVSSDLKETSFQKNEAQQKTFL
NNPLTVSKKRLKNSIEKVSEWLLKTDRVHPFNEESLYEQDISLEFTTKEKENQLSEEESC
TSYKTEIITLDISEKHDLSRSLIKQVPTNIEDQIFGKTYRREKKQNPHINWSVTSENKGI
TTSHLAKEFEIAKPSKLSLGKKNKRTLQLEPEDFIKTDLIKSKDQDKENLTEQINCLSNT
NNETEKDKGVSHHVIERTDDMQDGTKSVSHPNEKVVTTREIEKSTESLKENREQEKSEID
KESTLQSKKVIKKRSKSDGMRSTKTTRALKLVSHEEFQNLGKTMADANFLESPNLTELQI
DNYSSSEEPKRPEFEHKRTRRSRKLQLLAEETQKETSKSLQLCSNQPQEKSTLKGSEVPV
VPPKKATSSKGPEAGAVVESQGLVQPDLQQAVNNQTEEVVEIAQRLSSSFDSHQPYSVMC
SDEQDVQKDHNTGSQSTPPAVPNTESQRSTQNSASLLPVQSFSLVQQCREPKDHTELDQN
TVDQTFLHTLPSENNSICTKNKMPESITNEVQLKEKRFSEVGGNTETEDSETDIQCLLKT
FRSSKRKSFVLEPSPEQEYKDQGSTFTGEGLVRSKEMNNAESCAVKCASLGTEDHQQEVA
SVKKSVGSLGVSPQNDQVDACGQIDSVQYSDKSEVLPSLSGSNSSHELCVSPLEQTPCQL
VGKQKRMTKNSKLQNKMENIGTRTSVTMIQECFNQGSCDWENVGRKDLHGMDLNFKKELN
ERKEVNVATVSNAFGHNAGSALTSHSESMLLFSATSQLSNTKTSQEMKGNCNQRKSEFLV
KENKVVHNKSFATEKMKTSVEEEDEELVAKNIEEQMHKSSLKKTSSQSNLPKTQESSILA
VGPSATKASQSCSETPDGLLASLEEKKGGYDSNEVEVSESPGKVKETTVVHCKVSENEKE
EDRSSPNSGSQCFIQGKRRRQVQKLDPSESESESGDDEELPCFQALVSGKPISRTSASQE
SSTKIFSNKSKVQILSLPNSNNENDNVLDKKLLACSPRQENRSPSLSSEHSFDLFSSPPD
LSGSLSCVPQNKTPTTSPKQKKGSNICPKDGKLENERPEKNIVLLDEQEEKLKEVLIQHT
KLREMNTEHNPGEASGYESEASHTGDSSALSSQTEILNTQQKDAMQSDLQKLEHEMAVLE
AFLEQGAQVSESSILQVQENECPQQRVPGKEDQSIEKGNGSAKVTIVEQAANNTLKISSN
KHLMMLEDGCPETDCVHKAKLERECARSSTPPSIPSGSPMEENQTPEKVKATFDLLGKLK
AKAIHQATKITCDGQDQAEEEVKQTSQNRHELGRENLMEKQEQLQHSITVTLDGICRKDV
GLPKRQSPSQLPATKSPLQQLSGVMASPNVTQKQITDSNLKKAEHSKVMCSSISSTYSKG
VNIMNAKSPVVVNQRKMSIVASGLNKNELLLVQRFARKTQSMLSSQITSGTTHVIMKTDA
ELVCERTLKYFLGIAGRKWVVSYQWITESFQQGRILDEYDFEVKGDVINGKNHEGPRRAR
QMSNDKLLLRGYEICCYGSFSDMSPDQLEWMLKLCGACAVKEPYLFSYSPNQTAVLVVQP
DANSTTTDYRALQRKYNAMVVTREWILDSVACYRCQNLDAYLVYP
NT seq 5898 nt   +upstreamnt  +downstreamnt
atggctttgtctaaatgcagtattgaagaggtgcaacgcgtcctctcaatgatgcacaag
aacttggaatgtccagtatgtttagagttattgagagaacctatttcaacaaaatgtgac
catcgattctgcaggttttgtatttcaaaacttctcaacaaaaagaaaaaaggtgcagca
cagtgtccattgtgcaaaagtgaagttactaagagcaacgttcaagaaagtcctcggttt
aagctgcttgttgaaggacttttaaagactattcaggcctttgaaattgacacaggatat
gcatgtaagtattgcaaaaccgttattttggtttcctggcaggaagaacagtctaagttg
cagcttccagatactatggtcataaaagtatctcaaagaaacaaacagcaaaaactaaac
aaccgtgttgtgccgatataccttgaagctggctctgattcgtctgaggagctactgttt
aaaaagaaaaccaatgctgaaagtcattgtattatgaattctaaagctattgaatgtgaa
gcacatcaagaaaaagtagttgaaagagtagaagctaattgtaggaacatgaaggatgat
ggggataacactacttgcatggtggaagcagaagagctgaaagtatctaccatagttgat
catgggttttcggatgatgactttgcaagtactttcaagagaaatggatcctttgatggg
gaatctgggggtgaaattcttagcttgactgaagatatatgtggggaagaccagtgcatt
ttggataataaccaagaaattaatgcatcacatgaaaacagagaccctgtgactaatatt
ggtttctcacagagtgatggtacatctttcatcactgacgctaatgcatggagtattgaa
aatggtggtaagagcaagtattcggagatggataaagggcagaaatataatttagatgaa
tccaaagggaaacttggtgttataaagcacttggaagaggttaatgaaaattataacgta
agttcagatctaaaggaaacctcttttcagaagaatgaagcacagcaaaaaacatttttg
aataatcccttaacagtttcaaagaaaagactgaaaaacagtattgagaaagtaagcgag
tggcttttaaaaactgatagggtgcacccctttaatgaagagagcctttatgaacaagac
atcagtttggaatttacaacgaaagaaaaggaaaaccagctatcagaagaggagtcttgt
acttcctataagactgaaatcatcacattagacatttctgagaagcatgatctcagtagg
tctttaataaaacaagtgccaaccaatatagaagatcaaatctttggaaaaacatataga
agagaaaagaagcaaaatccacacatcaattggagtgttacttctgaaaataaaggcatt
accacttcccacttggctaaagagtttgaaattgccaaaccatctaaacttagcttaggg
aagaaaaacaaaaggacattacagctagaacctgaagactttatcaaaacagaccttatt
aaaagtaaagaccaggataaagagaacctcacagaacaaataaattgtttatctaataca
aataatgaaacagagaaagacaaaggtgtatcacatcatgtcattgaaagaacagatgac
atgcaggatggaactaaatctgtgtctcatccgaatgagaaagttgtgactacaagagag
attgaaaaatctacagaaagcctaaaagaaaatagggagcaagaaaagtctgaaattgat
aaagaaagcacattgcagtcaaagaaagtcatcaaaaagagaagcaagtctgatggaatg
cggtcaaccaaaacaactagagcactaaagttagttagtcatgaggaatttcagaatctg
ggtaaaacaatggctgatgcaaactttttagaaagtcctaatctgactgagctgcaaatt
gataattattcaagtagtgaagagccaaaaaggcctgaatttgagcataaaagaactagg
agaagcaggaagcttcagctacttgcggaagaaactcaaaaggaaacaagcaagagcctc
caactatgttctaaccagccacaggaaaaaagtactttgaaagggagtgaagttcctgtt
gtgccccccaaaaaggctacatctagtaaaggccctgaagctggggctgttgtcgaatcg
cagggtcttgtacaacctgatctgcagcaagctgtgaataatcagactgaagaagttgtt
gaaattgcacaaagattatcctctagttttgattcacaccaaccttactctgtgatgtgt
agtgatgaacaggatgtgcaaaaggaccataacactggaagccaaagcacacctcctgca
gttcccaatacagaatctcaaagatctactcaaaacagtgcgtcactgctaccagttcag
tcttttagtcttgttcaacagtgcagggagccgaaagatcacactgaacttgaccaaaat
acagttgatcaaactttcttgcatactttacccagtgaaaacaattctatatgcacaaaa
aataaaatgccagaaagcattactaatgaagtacaattgaaagaaaagagattttcagag
gtggggggtaacacagaaactgaagacagtgaaactgatattcagtgtttgttaaagaca
ttcagatcttctaaaagaaagtcatttgtacttgagcctagcccagagcaggagtacaaa
gaccagggttcaacctttaccggtgagggtctggtgagatccaaagaaatgaataacgct
gaaagttgcgcagtaaaatgtgcaagtcttggaactgaagaccaccaacaggaagttgca
tcagtaaagaagtcagttggttcgcttggagtaagtccgcaaaatgatcaggtggatgct
tgtggtcagattgattcagtacagtatagtgataaatctgaggtattgccttcactcagt
ggttcgaattcctcacatgaattatgtgtttctcccttggagcagacaccatgccaactc
gttggcaaacagaagagaatgaccaaaaacagcaagttacaaaataaaatggaaaatatt
ggaaccagaacttcagtgactatgattcaagaatgcttcaaccagggcagttgtgattgg
gagaatgttggcagaaaagatcttcatggaatggacttaaactttaaaaaggaactcaat
gaaaggaaagaagttaatgtagcaactgttagtaatgcatttggtcacaatgcaggatct
gcattaacttcacattctgaatcaatgcttttattttctgctactagtcaactaagcaac
acaaaaactagccaagaaatgaagggaaattgtaatcaaagaaaaagtgaatttctagtg
aaagaaaataaagttgttcataacaaatcatttgccacagaaaaaatgaaaactagtgta
gaagaggaagatgaggaactagttgccaaaaatatagaagagcaaatgcacaaaagcagt
ctaaagaaaacttcatcacagtctaatttgccaaagacacaagaaagctcaattttagct
gttggtcctagcgcaacaaaagcttcacagagctgttctgagacgccagatggtctactt
gcatctttagaagaaaagaaaggtggatatgatagtaatgaagtggaggtaagtgaaagt
ccaggaaaggttaaggaaaccaccgtagttcattgtaaagtgtctgaaaatgagaaggag
gaggacaggagttcaccaaactcggggtctcaatgcttcatccaaggaaagaggcggcgg
caagtgcaaaaactggacccatctgaatctgaatccgaatccggtgatgatgaagaattg
ccatgctttcaggccttagtgtctggaaaaccaataagtaggacatcagcgagccaggaa
agttctaccaaaatattttcaaataagtccaaggtacagattctttcacttccaaacagc
aacaatgaaaatgataatgttctggataaaaaattgctagcatgttcccccaggcaagaa
aatagatctccaagcctgagttcagagcactcttttgacttattttcttccccacctgat
ttgtcaggcagcttatcttgtgtaccacagaacaaaacgcccacaactagtcccaaacaa
aaaaaaggatccaatatctgtcctaaggatggtaaactggaaaatgagagaccagagaag
aacattgtacttctggatgaacaggaagaaaaattgaaagaagtgcttatccagcacacc
aaacttagagaaatgaatacagagcataatccaggagaagcatctgggtatgaaagtgaa
gccagtcacacaggagattcttctgcactttcctctcagactgaaattcttaacactcag
cagaaggatgccatgcagagtgacttacagaaactagagcatgaaatggctgtgcttgaa
gcattcttagaacaaggggcacaggtgtctgaatcttccatcctccaggtccaggagaat
gaatgccctcagcagagggtacctggaaaagaggaccaaagtatagaaaaaggaaatgga
tcagcaaaagtcacaattgtagagcaggcggcaaataacacattaaaaatttcatctaat
aagcacctaatgatgctggaggatggttgccctgaaacagactgtgtacacaaagcaaaa
ctagagagagaatgtgcaaggtcttcaactcctccatctatcccctctggttccccgatg
gaagagaaccaaactccagagaaagtgaaagctacctttgatcttctgggaaaactcaaa
gcaaaagccatccatcaggctacaaaaataacatgtgatgggcaggaccaagcagaggag
gaagtaaagcaaactagtcaaaacaggcatgaattaggtagagaaaatctgatggaaaag
caagagcaattgcagcatagtattacagtaaccctggatggaatttgtagaaaagacgtg
ggtttacccaaaagacagtccccttcccagcttccagcaacaaaatctcctttacagcag
ctttctggagtgatggccagccctaatgtgacccaaaagcaaattacagacagtaacctc
aaaaaagctgaacatagtaaagtgatgtgctcttctatatcatctacatacagcaaaggt
gttaatattatgaatgcgaagagtccagttgtggtgaaccagagaaaaatgtccattgtg
gcatctggcctaaataaaaatgagcttctactagtgcagaggtttgcaagaaaaacccag
agcatgttatccagtcaaataacatctggaactacccatgtcattatgaaaaccgatgct
gaattagtgtgtgaaagaacattgaaatacttcctgggtatagcaggcagaaagtgggtg
gtgagttaccagtggatcactgaatcttttcaacaaggaagaatacttgatgagtatgat
tttgaagtcaaaggtgatgtaatcaatgggaagaaccatgaggggcctagaagagcaaga
caaatgagcaatgacaagttgctgttaagagggtatgaaatttgctgttatggttcattt
tctgacatgagtccagatcagttggaatggatgttaaagttgtgtggagcctgtgccgtg
aaggagccttatttattctcctatagcccaaaccaaactgcagtgctggttgtgcagcca
gatgccaatagtacaacaacagactacagagcactgcagcgaaagtataatgcgatggtg
gtgactcgagagtggattctagatagtgtagcatgctaccgatgccaaaacttagatgca
tacctggtctacccatga

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