Larimichthys crocea (large yellow croaker): 104920543
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Entry
104920543 CDS
T04659
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00310
Lysine degradation
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104920543 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104920543 (setdb1)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
104920543 (setdb1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104920543 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104920543 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
104920543
NCBI-ProteinID:
XP_010731132
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All DBs
Position
XIII:complement(15517342..15529441)
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AA seq
1245 aa
AA seq
DB search
MESGERMEVDGWDPSLEEELGVSLDELKKWIEEAVEKSEIVQKKKAQLTELKEWVEQKEE
EKARTEVLLNDANQSILECEKLVKATYHRNGLVYRESSSEDEGVGGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKPGTPVKDPVVKEASAALQKTTQQVQKLAQMVSKPPGAPLLRPPPQ
SPSQSGIQSSVPSVFVSQVPSQSMTQPNPNIKQDELRVGMSILGKKRTKTWHRGTLVAIS
PVGNGIYKYKVKFDKGKSLLSGNHVAFDYNPTLEILYVGARVVAKYKDGNLVWLYAGIVA
EMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPLQRTWEDIEDASCRDFIEEYITAYPS
RPMVLLKVAQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLK
MTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPVKTPQSSPSQPSQTPQQ
QQQRPQPAQPQPTQQSPQLLQSVQPPQAPRVDNKHQMAKKSTSPFVPGIGGTHASKVMQS
LSSSPSNISSGRMLNAQNAGTPTFAQSYQRQLTPLAPAPPSVTHMATIPHQPAYRAPTDR
IFYLAHACQPACLNRVRPSKSDMHRGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAP
CGLCLRNMAEIQHYLFQTRCDFIFLEMFCLDPYVLVDRPFQPQRPFYYINDITGGKEDIP
LSCVNEIDSTPPPKVAYSKERIPEDGVYINTSDDFLVGCECTDGCRDKSKCSCHQLTLQA
TGCTPGAQINPNAGYLHKRLEECLPTGIYECNKRCKCCAQMCTNRLVQHGLQVRLQLFKT
QNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGY
ESEAHCSDSEGSGVDVSRIKIPPSALVSSNPVGRPPRKGESNSKARSPSSSDESNEDDDK
DSKSEDESDSSDDTFVKDNYYNSSSVWRSYTTRGQAKGNKEGSQDSKDGLSVSAKGTDDE
KPPSMPEETGKSKVASWLTSQGLKKESGDSKSQVKSETGKKQDVMTLSDSDDVQTISSGS
DDNKEREKVTPGVTKKQVAVKSTRGIALKTGHGMMVKTGTPGGGGGPGGQGGKAGQQGQT
GGGGDNGPKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPW
VAFFASKRIRAGTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggcgagcggatggaggtggacggctgggaccccagtctggaggaagaactg
ggcgtttctctagacgagctgaagaaatggatcgaagaggccgtggagaaaagcgagatc
gtgcagaagaaaaaggctcagctgacggagctcaaggaatgggtggagcagaaagaggaa
gagaaggcgaggacggaggtgcttctcaacgatgccaatcagtccatattggagtgcgag
aaactagtgaaggcaacttatcataggaatggtctcgtttaccgtgagagcagctcagag
gacgagggggtgggaggaggcgtgttgtcctctgaggtcatcgaaatagacgatgacgac
gacgacgacgtcatcgctgttggctgtttggttcctccaaagaagcctggcactcctgtc
aaagatccagtggtaaaagaggcgtctgcagctctacagaaaaccacccagcaggtgcag
aaattggcccaaatggtcagcaagccgccgggtgctccattgctcagacctccaccgcag
tctccatcccagtcaggtattcagagctcagtgccatcagtgtttgtatcccaggttcca
tctcagtccatgacccagccgaacccaaacatcaaacaagacgagctcagagtcgggatg
agcattttaggaaagaaacgcaccaagacatggcacagaggcactctcgttgccatcagc
cctgtcggaaatggtatatataagtataaagtgaagtttgataaaggaaagagcctgctg
tctggaaatcacgtggctttcgactataaccccaccttggagattctgtatgtcggggct
cgagtagttgccaagtacaaggacggcaacctggtgtggctctatgctggaatagtagca
gagatgcccaacaacaagaaccgtatgaggtttttgatcttttttgacgatggctatgct
tcatatgtgacactacctgagctttacccagtttgtcgaccattgcagcgtacctgggag
gacatagaggatgcatcgtgtcgggatttcatcgaggagtacatcactgcttatcccagc
aggcctatggtgctcctaaaggtcgcacagatcatcaagacagagtgggaaggaacgtgg
tggaagagcaaagtggaggaggtggatggaagcttggtcaagatcctctttttggatgac
aagaggagtgagtggatctatagaggctccaccaggttagagccaatgttcaacctgaag
atgaccaccgccaacacccaggagaagaagctggcaggccagcagaggacacggcctaac
atgggagcgttgaggagtaaaggcccagtagttcagtacaccagtgacggacatgttgga
gcctcccctgtcaaaacaccacagtcctcacccagccagccttcacagacaccacaacag
caacaacaacgtcctcagcctgcacagccccaaccaacccaacaaagccctcagctttta
cagtctgtgcagcccccacaggctccacgtgttgacaataaacatcagatggcaaagaag
agtacttctccgtttgtccctgggataggaggcacacatgcctccaaagtcatgcagtct
ctttcctccagtcccagtaacatctctagtggaagaatgttaaatgcccaaaatgctggt
acgcccacgttcgcacagtcgtatcagagacagctaacccctctggctccggcccctcct
tctgtcacccacatggccaccatcccacatcagcccgcataccgtgccccgacggaccgc
atcttttacctggcacatgcttgtcagcccgcctgtctgaatcgtgtccgaccgtcaaaa
tcagacatgcatcgaggaaagaaccccctgctcacacctttactgtacgatttcaggcgc
atgacgggacgacgcaaagtcaaccgcaagatgtcctttcatgtgatctacaaggctccg
tgtgggctttgcctgcgtaacatggcggagatccaacactacctcttccagacgcgctgt
gactttatattcttagagatgttctgtctagacccttacgtgctcgtggaccggccattc
cagccacaaaggcctttctattatattaacgacatcaccggggggaaggaggacatccca
ctctcctgtgtcaacgagatcgattccacgccgcctcctaaagtagcttacagtaaagaa
cgtattcctgaagatggagtgtacatcaacaccagcgatgacttcctggttgggtgtgaa
tgcacagacggctgtcgagacaagtccaaatgctcttgccaccagctgacccttcaggct
acaggttgcacaccgggggcacagatcaacccgaatgctggatatttgcacaaacgatta
gaggagtgcctccctacagggatctacgagtgtaataagcggtgtaaatgctgtgcccaa
atgtgcaccaaccggttggtgcagcacggcctgcaggtgcgtctccaactcttcaagaca
cagaacaaaggctggggcatccgatgtctggatgatgtggccaagggctcctttgtctgc
atctatgctggtaaaatcttgacagacgactttgcagataaagaaggtctagagatgggt
gacgagtacttcgctaatctggaccatatagagagcgtggagaacttcaaggagggttat
gagagcgaggctcactgttcggacagtgaggggagcggggtggacgtgtcgaggataaaa
atcccaccatccgctttggtatcgtctaaccctgtggggcgaccgcccaggaagggtgag
tccaattccaaagcccgaagtccgagctcatcagacgagagtaatgaagacgatgacaag
gattcaaagagtgaagatgagagcgacagttcagacgacacgtttgtgaaagacaactac
tacaactccagctctgtgtggaggagttacaccacacgtggtcaggccaagggcaacaag
gaagggagtcaagacagtaaggatggcttgagtgtgtcagccaaaggaactgatgacgag
aagccaccgtccatgccagaggagacggggaaaagcaaagtggcttcctggcttaccagc
cagggacttaagaaggaatccggagacagcaagagtcaagtgaagtcagaaactgggaag
aagcaggatgtgatgactctgtccgacagtgatgatgttcagaccatcagctctggatct
gacgacaacaaggagagagagaaagtcaccccgggtgttactaagaagcaggtagctgtg
aaatctactcgaggcatcgccctgaagactggccacgggatgatggtaaaaacaggtaca
cctggaggtgggggagggccaggaggtcagggaggaaaagcaggacagcaaggacagact
ggaggaggaggagacaacggtcccaaaaacacccgtctgttctttgacggtgaagagtcc
tgctacatcatcgatgccaagctggaaggaaaccttgggcgttacctcaatcatagctgc
agtccgaaccttttcgtccagaatgtgtttgtggacacacatgacttgcggtttccctgg
gtggcgttctttgccagcaagcggatccgggctggcacagagctgacctgggactacaac
tacgaggtgggcagcgtggaggggaaggtgctgctttgctgctgtggatccaccgagtgc
agaggcagactgttgtga
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