Schleiferilactobacillus harbinensis: D1010_08060
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Entry
D1010_08060 CDS
T06855
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lhb
Schleiferilactobacillus harbinensis
Pathway
lhb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1010_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhb03400
]
D1010_08060
Enzymes [BR:
lhb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D1010_08060
DNA repair and recombination proteins [BR:
lhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1010_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD_C
AAA_16
UvrD-helicase
HHH_5
AAA_12
AAA_28
AAA
nSTAND3
TsaE
Zeta_toxin
RsgA_GTPase
HHH
HTH_IclR
AAA_29
TrwB_AAD_bind
AAA_18
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QFR23357
UniProt:
A0A5P8M4W5
LinkDB
All DBs
Position
1530213..1532657
Genome browser
AA seq
814 aa
AA seq
DB search
MAATRNKGEEAEVTGQVMSIFFQNPTNFFKIMLLHVDHISVPWTESEIVVTGTFGTVKED
DTLTCIGHLVNHPKYGRQFAADRYEQETPTSKSGLIAYLSDKQFKGIGPKTAERIVDRLG
LDAITKIIKDPRSLAGVGLTQKVQDGFVATLKQTYGMERVMLQLNTWGIPSNLASMIYQR
YQEETLTKLEEDPYRLVTDVTGVGFRRADEIAQSLQVLATDPRRLRSAISAAFNRLNNDE
GAIYTQAPVLLHTAVNVLAQGVLHPTPPMAVLSDVLKDMVRERTVISEDGRLYLATYYEA
EWQIASGLKKLHEADIDADWSQKKVHAAVTTVAKKLQVTYDESQVEALTTALTRPVFLLT
GGPGTGKTTVIRGLIDAYADLHDVSLDPGDYTDTPFPIQLAAPTGRAAKRMSELTGLPAG
TIHRLLGLTGRDPGELFKEPGPISAQLVIIDEMSMVDMFLFRQLIRAITPGTQLVLVGDK
DQLPSVGPGQVFADLLASGSLPASYLTKIHRQAAGSSIVQMAHAINDGIIPPDLFNNQAD
RSFFAVSADQVPAVVGQVVARARDKGFSPLDIQVLAPMYRGPAGVTHLNDVLQEVLNPAA
PDNPKEIVVGTTHYRIGDKVLQLVNDPEHNVFNGEIGRVTALTPAKQDTDHRDRLTVAFD
ETEVTYGRGDFNSITRAYCTTIHKAQGSEFPLVILPVVHEYGRMLERNLLYTAITRAEKL
LIMVGEESAVTQAIHRPGARRATTLPQRLQTQFKTVPAQRVAQSAPDVNEAVAAELPEPP
LTYQMILQHRIDPMIGMTGITPQDFLNATEDKEG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacccgcaataaaggggaagaagctgaagtcaccgggcaggtgatgagtatt
ttcttccaaaaccccacgaatttcttcaagatcatgctgctgcacgtggatcatatctcg
gtgccttggacagaaagcgagatcgtggtcaccggaacgttcggtacggtcaaagaagac
gatacattgacttgcatcggtcatttagtgaatcatcctaaatatggccggcagttcgcg
gcagaccgctacgaacaggaaaccccaacgtctaagagcggcttgattgcctatctttca
gataagcagtttaaagggatcggtcccaaaaccgcagagcggatcgtggaccgcttgggt
ttggatgccattacgaagatcatcaaagatccccgcagtttggccggggtggggctcacc
cagaaagtgcaggacggattcgtcgcgacgctgaagcaaacctacgggatggagcgggtg
atgcttcaactgaatacttgggggatccccagcaacttggccagtatgatctaccagcgc
tatcaagaggaaaccctcaccaagttggaggaagatccttaccgtttggtgaccgatgtc
actggcgttggtttccgccgagcggacgaaattgcccaatcactgcaggtgctggcgacc
gatccgcgacgactgcgcagcgccatttcggcagcgttcaatcgcctcaacaatgacgaa
ggggcgatttacacccaggccccggtactgctgcacaccgcagtgaatgtgctggcccaa
ggggtcttgcatccaacgccccccatggcagtgctgagcgacgtgttgaaggatatggtg
cgggaaagaacagtcatcagtgaagacggccgcctgtatttagcgacatattatgaagcc
gaatggcaaattgccagcggcttgaaaaagctccatgaggccgacattgacgcggactgg
tcgcagaaaaaggtccatgcggcagtcacgacagtggccaagaaattacaggtgacatac
gatgagagtcaagttgaagccctaaccactgcgctgacccgaccggtctttctcttgact
ggcggtccgggcacgggtaaaacaacggtcatccgggggttgatcgatgcctatgcggat
ctgcatgacgtttccctggacccgggggattacacggacaccccgtttcccattcaactc
gctgcccccactgggcgtgcggcaaagcggatgagcgagctgaccggattgccggcgggc
accattcacaggttgctgggcttgaccgggcgtgatcccggcgaattattcaaggaacct
ggcccaatcagtgcccaactcgtgatcattgacgaaatgtcgatggttgacatgttcttg
tttcgtcaactgattcgcgccatcacccccggcacgcaattggtactggtgggggataag
gatcagctgccctccgtgggccctggccaggtctttgcggatctgctcgccagcgggagt
ttgccagcgtcctacttgactaagatccaccgtcaagcggccggctcatcgatcgtccaa
atggcccatgccatcaatgacggtattatcccgccggacctgttcaataatcaggctgac
cgcagtttttttgctgtttctgccgaccaagtgccggcagtggtcggccaagttgtggcc
cgcgcccgggataaggggttcagtccgctggacatccaggtcttggcgcccatgtaccgc
ggcccggctggggtcactcatttgaatgatgtactccaagaagttttgaatccggctgcc
ccggataatcccaaggagatcgtagtgggtactacccattaccgtattggcgataaggta
ttgcaattggtgaacgatccggagcataacgtctttaacggcgaaatcggccgggtcacc
gcgctgacgccggccaagcaggataccgaccaccgggaccggctgaccgtggccttcgat
gaaacggaggtcacgtatgggcggggggactttaacagtatcacgcgagcttattgcacg
accatccataaggctcaggggagcgagtttccgctggtcattttgccggtggtccatgaa
tatggtcggatgctggaacgcaatctgctgtataccgccatcacccgggctgaaaagctg
ctgatcatggtcggggaggaatcagcggtgacccaagcaattcaccggccaggggcgcgc
cgagcgaccacgctgccccagcggctgcaaacgcagttcaagacggtacctgctcagcgg
gttgctcagtcagcgccggacgttaatgaagcagttgcggccgaattgccagagccgcct
ttgacgtatcagatgatcctgcagcatcgtatcgatccgatgattggcatgacgggcatt
acgccccaggattttcttaacgcaacagaagataaggaaggataa
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