Listeria innocua (serotype 6a): lin1870 Help Entry lin1870           CDS       T00067                                  Name (GenBank) similar to DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism lin  Listeria innocua (serotype 6a) Pathway lin03030   DNA replication lin03410   Base excision repair lin03420   Nucleotide excision repair lin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lin00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     lin1870    03410 Base excision repair     lin1870    03420 Nucleotide excision repair     lin1870    03430 Mismatch repair     lin1870  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lin03032]     lin1870    03400 DNA repair and recombination proteins [BR:lin03400]     lin1870 Enzymes [BR:lin01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      lin1870 DNA replication proteins [BR:lin03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      lin1870 DNA repair and recombination proteins [BR:lin03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      lin1870    NER (nucleotide excision repair)     GGR (global genome repair) factors      lin1870    MMR (mismatch excision repair)     DNA ligase      lin1870   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       lin1870 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 RNA_pol_A_CTD HHH_8 Motif Other DBs NCBI-ProteinID:  CAC97100 Pasteur:  LIN01870 UniProt:  Q92AQ0 LinkDB All DBs Position complement(1882432..1884447) Genome browser AA seq 671 aa AA seqDB search MADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKIEEAHPEWVTPESPSKR VGGEVLEGFKKVEHDTPMLSLANAFNRDDLADFDRRIRDKVGDDISYMCELKIDGLAVSL QYENGKYKQGATRGDGTVGEDITANLRTIRSIPMKLKKAYSIEVRGEAFMPKRSFQKLNE IREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFLYAVADFGEMGVETHSAGLDMLE TLGLKVNKERRLCSNLEEVYAYIDEWTEKRAGLAYDIDGIVLKLNNLEQQRQMGTTVKSP RWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTAVLEPVRVAGTTVSRASLHNEDLITEK DIRIGDTVLIKKAGDIIPEVIKSITEERTGSEKPFHMPKNCPTCDSELVRLEEEVALRCI NPKCPAQIKEGLIHFVSRNAMNIDGLGEKVIIQLFSMHLIKDVADLFFLSKEKLLELERM GEKSVTNLLASIEASKQNSLEKLLFGLGIRHVGAKAAKSLAVHFETMDNLKIADKETLTS INDIGEKMADSIVTYFANEEVHDLLEELKRAGVNMTYTGPKLENMSEEELVFAGKTVVLT GKLEKLTRNDAKALIESLGGNVSGSVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDLI EYLPDEGGLNE NT seq 2016 nt NT seq  +upstreamnt  +downstreamnt atggctgataaaaaacggtatgaagaactaataaacatacttgatcaatacagctatgat tattatgtaattgataatccaacagtagaagatgccgaatacgatcaaaagatgcaagaa ctacttaaaatagaagaagcgcatccagaatgggttacacctgaatcaccgtcgaaacga gtaggcggagaagttttagaaggttttaaaaaagtagaacatgacacaccaatgttaagc ttggccaatgcgtttaatcgcgatgatttggctgattttgaccgccgtatccgcgataaa gtcggtgatgacattagttatatgtgcgaactgaaaattgacggactagccgtatcactt caatacgaaaatggtaagtataaacaaggtgctacgcgaggtgatggaacagttggtgaa gacatcactgctaatttacgcacgattcgttctatcccaatgaaactgaaaaaagcttat tccattgaagtccgcggtgaagcttttatgccaaaacgttccttccaaaaattaaatgaa atacgcgaagaagaaggccagatgttatttgcaaatccgcgaaatgcagcggctggctca cttcgtcaattagatacaaaaattgctgcatctagaaaccttgatattttcctttatgca gtagctgattttggtgaaatgggtgttgaaacacatagcgcgggcttagatatgcttgaa acactaggccttaaagtcaataaagagcgtagactttgcagtaatttagaggaagtatat gcttacattgacgagtggacggaaaaacgagctggtttagcttacgatattgatggtatc gttttaaaattaaataatttagaacaacaacgccaaatggggacaacagttaaatcacca cgatggtcaattgcttataaatttcctgcagaagaagtacccactaaactgcttgatatt gaattaaacgttggcagaactggcgtaataactcccacagcggtgttagaaccagtaaga gttgcaggaactacagttagccgtgcgtcacttcataacgaagacttaattacagaaaaa gatattcgcattggcgataccgttttaattaaaaaagcaggcgatattattcctgaagtg attaagagcattaccgaagaacgtactggtagtgaaaaacctttccatatgccaaaaaac tgtccaacatgtgatagtgaacttgtccgcttggaagaagaagtagcactaagatgtatt aatcctaagtgtccagctcaaattaaagaggggcttatccattttgtttcaagaaatgcg atgaatatcgatggccttggagaaaaagttattattcagctattttcaatgcatttaatt aaagatgttgcagatttgtttttcctttcgaaagagaaactgttagaattagaaagaatg ggtgagaaatcagtaaccaatttactggcatccatcgaagcaagtaaacaaaattcgctt gaaaaattactttttggcttgggaatccgccatgttggtgctaaagcagccaaatcgctt gcagttcattttgaaacaatggataatttgaaaatagcagacaaagaaacactgacaagt attaatgacattggggaaaaaatggcagatagcatcgtgacttattttgcgaatgaagaa gtacatgatttactggaagaactaaaaagggctggcgtcaatatgacctatacagggcca aaactagaaaacatgtccgaagaggagcttgtttttgcagggaaaacagttgttttaact ggaaaactggaaaaattaacacgaaacgatgcaaaagcattaatcgaatcactcggggga aatgtttctggaagcgtcagtaagaaaacggatgttgttgtagctggcagtgatgctggt tctaaactagccaaagctgaagaactagcaattcctatttggtccgaagaagacttaata gagtacttaccagacgaaggtggattaaacgaatga

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