Lactobacillus johnsonii NCC 533: LJ_0565
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Entry
LJ_0565 CDS
T00158
Definition
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--lysine ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo00300
Lysine biosynthesis
ljo00550
Peptidoglycan biosynthesis
ljo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LJ_0565
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LJ_0565
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ljo01011
]
LJ_0565
Enzymes [BR:
ljo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LJ_0565
Peptidoglycan biosynthesis and degradation proteins [BR:
ljo01011
]
Precursor biosynthesis
Amino acid ligase
LJ_0565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AAS09656
UniProt:
Q74HN4
LinkDB
All DBs
Position
complement(1815610..1817181)
Genome map
AA seq
523 aa
AA seq
DB search
MSDSSISLNTCILILKEHHLLKSSAVQDAVPTKMDYISYDSRDIKTNTLFFCKGKGFRPT
YLSMAKDSGATCYVAEQPYPEGKGMHALVVRDVTKAMALLSAAFYRFPQDDLYVVAFTGT
KGKTTSAYFLKGMLDQINGGRTALFSSVDDIVGPKPEDKFKASLTTPESLDLFRDMRTAV
DNGMTHLVMEVSSQAYKKNRVFGLTYDLGFFLNITPDHIGPNEHPNFADYLHCKLQLMVN
SRKCIINAMSDHFDEIYAAATTTTNPDSIYLFARNDFENPNLKQPIDFRFQSVETDMKET
EFKLFCASDKAKKLPIAGDYTLQMIGDFNEMNGTAAIIGAGLAGENYEECAKGIRHVTIP
GRMEALPSKNHGTVIVDYAHNKASMMALMSFMQREFNNPKIIVVVGAPGDKGVSRRPGFS
ESLTAYADKAFLTTDDPGFEDPMDIAQEIDAGIDHEKVDVTIELDREKAIHDAIAMSDKD
DIVLICGKGADPYQKIRGVDTPYPTDIKVAESVINELEKDDEE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattctagcatttctttaaacacttgcatcttaatattgaaggaacaccacttg
cttaaatcaagcgctgttcaagatgcggttccaactaaaatggattatatttcctatgat
tcacgtgatataaaaacaaatactttgtttttctgtaaaggtaaaggctttagacctact
tatttatcaatggctaaagatagtggagctacttgttatgtagcagaacaaccatatcca
gaaggtaaaggaatgcatgctttagttgttagagatgtaactaaagccatggctctttta
tctgctgccttttacagattcccgcaagatgatttatatgtagtagcctttaccggtaca
aagggtaagacaacatctgcatatttcttgaaggggatgcttgaccaaattaatggtggt
cgaacagcactattttcatcagtagatgatattgtaggaccaaagcctgaagacaaattt
aaggcgagtttaactacacccgaaagtttagacttgttcagagatatgagaacagctgtt
gataacggtatgactcatttagtaatggaagtttctagtcaggcttataagaaaaatcgt
gtctttggtttaacttacgatctcggatttttcttaaatattactccagatcacattgga
ccaaatgaacaccctaactttgcagattatttgcactgtaagttgcaattaatggttaac
tcacgtaagtgtattatcaatgcaatgtctgatcactttgatgagatttatgcagctgca
actactactacgaatccagatagtatctatttatttgccagaaatgattttgaaaatcct
aacttaaagcaaccaattgatttccgtttccaatcagttgaaactgatatgaaagaaact
gaattcaaattattctgtgcatctgataaagctaagaaattaccaattgctggtgactac
actcttcaaatgattggtgatttcaacgaaatgaatggtactgctgctattattggtgct
ggacttgccggcgaaaattatgaagaatgtgctaaaggtattcgtcacgttactattcca
ggaagaatggaagctttgccatcaaagaatcatggtactgtaattgttgattatgcacat
aataaggcttcaatgatggctttaatgagctttatgcagcgtgaatttaacaatccaaaa
atcatcgtagttgttggagctcctggtgataaaggagtatcacgtcgaccaggatttagt
gagagtttaactgcttatgcagataaagcctttttaacaactgatgatcctggttttgaa
gatccaatggatatcgcacaggaaattgatgcaggcattgatcatgaaaaagttgatgtc
acaattgagttagatcgtgaaaaggcaattcatgatgcaattgcaatgtccgataaggat
gacatcgttttgatttgtggtaagggagccgacccataccaaaagattcgcggagtagat
acaccatatccaactgacatcaaagttgcggaaagtgtaattaatgaactagaaaaagat
gatgaggaatag
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